Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31290 | 94093;94094;94095 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
N2AB | 29649 | 89170;89171;89172 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
N2A | 28722 | 86389;86390;86391 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
N2B | 22225 | 66898;66899;66900 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
Novex-1 | 22350 | 67273;67274;67275 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
Novex-2 | 22417 | 67474;67475;67476 | chr2:178547758;178547757;178547756 | chr2:179412485;179412484;179412483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs755965938 | -1.79 | 1.0 | N | 0.783 | 0.716 | 0.890960720082 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4656 | ambiguous | 0.5307 | ambiguous | -2.549 | Highly Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
L/C | 0.7247 | likely_pathogenic | 0.7574 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
L/D | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -2.827 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
L/E | 0.9909 | likely_pathogenic | 0.9937 | pathogenic | -2.595 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
L/F | 0.8166 | likely_pathogenic | 0.8639 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
L/G | 0.9365 | likely_pathogenic | 0.9505 | pathogenic | -3.104 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
L/H | 0.99 | likely_pathogenic | 0.9941 | pathogenic | -2.614 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
L/I | 0.2089 | likely_benign | 0.2501 | benign | -0.947 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | I |
L/K | 0.9914 | likely_pathogenic | 0.9942 | pathogenic | -1.946 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
L/M | 0.2562 | likely_benign | 0.3344 | benign | -1.06 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.488846335 | None | None | I |
L/N | 0.9933 | likely_pathogenic | 0.9954 | pathogenic | -2.294 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
L/P | 0.9934 | likely_pathogenic | 0.9958 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.50720408 | None | None | I |
L/Q | 0.964 | likely_pathogenic | 0.9784 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.50720408 | None | None | I |
L/R | 0.9739 | likely_pathogenic | 0.9812 | pathogenic | -1.723 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.50720408 | None | None | I |
L/S | 0.9243 | likely_pathogenic | 0.9491 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
L/T | 0.7357 | likely_pathogenic | 0.8107 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
L/V | 0.1415 | likely_benign | 0.1622 | benign | -1.462 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.433484409 | None | None | I |
L/W | 0.9825 | likely_pathogenic | 0.9888 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
L/Y | 0.9852 | likely_pathogenic | 0.9904 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.