Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31291 | 94096;94097;94098 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
N2AB | 29650 | 89173;89174;89175 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
N2A | 28723 | 86392;86393;86394 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
N2B | 22226 | 66901;66902;66903 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
Novex-1 | 22351 | 67276;67277;67278 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
Novex-2 | 22418 | 67477;67478;67479 | chr2:178547755;178547754;178547753 | chr2:179412482;179412481;179412480 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1471852535 | -1.149 | 1.0 | N | 0.758 | 0.533 | 0.637385919607 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/K | None | None | 0.999 | N | 0.703 | 0.397 | 0.484109215787 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2654 | likely_benign | 0.3012 | benign | -0.732 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.514223067 | None | None | N |
E/C | 0.8893 | likely_pathogenic | 0.9096 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.3223 | likely_benign | 0.3957 | ambiguous | -0.697 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.503698587 | None | None | N |
E/F | 0.9139 | likely_pathogenic | 0.934 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.3293 | likely_benign | 0.3807 | ambiguous | -0.977 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.489317315 | None | None | N |
E/H | 0.6283 | likely_pathogenic | 0.6797 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/I | 0.6314 | likely_pathogenic | 0.6672 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/K | 0.3271 | likely_benign | 0.3417 | ambiguous | 0.01 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.488593904 | None | None | N |
E/L | 0.6741 | likely_pathogenic | 0.7155 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/M | 0.6705 | likely_pathogenic | 0.7024 | pathogenic | 0.296 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/N | 0.5074 | ambiguous | 0.5861 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/P | 0.9834 | likely_pathogenic | 0.9878 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Q | 0.1616 | likely_benign | 0.1671 | benign | -0.282 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | D | 0.528133727 | None | None | N |
E/R | 0.4338 | ambiguous | 0.4523 | ambiguous | 0.103 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/S | 0.3143 | likely_benign | 0.3608 | ambiguous | -0.509 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
E/T | 0.3294 | likely_benign | 0.3784 | ambiguous | -0.309 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/V | 0.3881 | ambiguous | 0.4245 | ambiguous | -0.289 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.516628654 | None | None | N |
E/W | 0.9527 | likely_pathogenic | 0.9616 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/Y | 0.8447 | likely_pathogenic | 0.8711 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.