Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31293 | 94102;94103;94104 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
N2AB | 29652 | 89179;89180;89181 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
N2A | 28725 | 86398;86399;86400 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
N2B | 22228 | 66907;66908;66909 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
Novex-1 | 22353 | 67282;67283;67284 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
Novex-2 | 22420 | 67483;67484;67485 | chr2:178547749;178547748;178547747 | chr2:179412476;179412475;179412474 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.988 | N | 0.383 | 0.422 | 0.566228512615 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0663 | likely_benign | 0.0684 | benign | -0.204 | Destabilizing | 0.061 | N | 0.206 | neutral | N | 0.412018632 | None | None | I |
T/C | 0.3563 | ambiguous | 0.4027 | ambiguous | -0.346 | Destabilizing | 0.999 | D | 0.418 | neutral | None | None | None | None | I |
T/D | 0.2674 | likely_benign | 0.3047 | benign | -0.086 | Destabilizing | 0.939 | D | 0.397 | neutral | None | None | None | None | I |
T/E | 0.2275 | likely_benign | 0.2596 | benign | -0.184 | Destabilizing | 0.939 | D | 0.381 | neutral | None | None | None | None | I |
T/F | 0.2178 | likely_benign | 0.2585 | benign | -0.89 | Destabilizing | 0.997 | D | 0.442 | neutral | None | None | None | None | I |
T/G | 0.1842 | likely_benign | 0.2188 | benign | -0.247 | Destabilizing | 0.759 | D | 0.379 | neutral | None | None | None | None | I |
T/H | 0.2209 | likely_benign | 0.2516 | benign | -0.449 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | I |
T/I | 0.1094 | likely_benign | 0.1264 | benign | -0.211 | Destabilizing | 0.988 | D | 0.383 | neutral | N | 0.448248791 | None | None | I |
T/K | 0.1712 | likely_benign | 0.1926 | benign | -0.308 | Destabilizing | 0.92 | D | 0.383 | neutral | N | 0.45092095 | None | None | I |
T/L | 0.0826 | likely_benign | 0.0907 | benign | -0.211 | Destabilizing | 0.939 | D | 0.375 | neutral | None | None | None | None | I |
T/M | 0.0814 | likely_benign | 0.0876 | benign | -0.15 | Destabilizing | 0.997 | D | 0.416 | neutral | None | None | None | None | I |
T/N | 0.1029 | likely_benign | 0.1098 | benign | -0.102 | Destabilizing | 0.939 | D | 0.356 | neutral | None | None | None | None | I |
T/P | 0.0995 | likely_benign | 0.114 | benign | -0.187 | Destabilizing | 0.988 | D | 0.392 | neutral | N | 0.434530133 | None | None | I |
T/Q | 0.1956 | likely_benign | 0.2274 | benign | -0.322 | Destabilizing | 0.991 | D | 0.403 | neutral | None | None | None | None | I |
T/R | 0.1514 | likely_benign | 0.1658 | benign | -0.037 | Destabilizing | 0.988 | D | 0.398 | neutral | N | 0.488959263 | None | None | I |
T/S | 0.0927 | likely_benign | 0.0978 | benign | -0.25 | Destabilizing | 0.159 | N | 0.215 | neutral | N | 0.399374622 | None | None | I |
T/V | 0.0957 | likely_benign | 0.1049 | benign | -0.187 | Destabilizing | 0.939 | D | 0.381 | neutral | None | None | None | None | I |
T/W | 0.5436 | ambiguous | 0.6115 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | I |
T/Y | 0.2641 | likely_benign | 0.2996 | benign | -0.659 | Destabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.