Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31296 | 94111;94112;94113 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
N2AB | 29655 | 89188;89189;89190 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
N2A | 28728 | 86407;86408;86409 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
N2B | 22231 | 66916;66917;66918 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
Novex-1 | 22356 | 67291;67292;67293 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
Novex-2 | 22423 | 67492;67493;67494 | chr2:178547740;178547739;178547738 | chr2:179412467;179412466;179412465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs794729534 | -0.218 | 0.014 | N | 0.229 | 0.084 | 0.435808882951 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 1.29182E-04 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs794729534 | -0.218 | 0.014 | N | 0.229 | 0.084 | 0.435808882951 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs794729534 | -0.218 | 0.014 | N | 0.229 | 0.084 | 0.435808882951 | gnomAD-4.0.0 | 1.15327E-05 | None | None | None | None | I | None | 1.35272E-04 | 1.69509E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1149 | likely_benign | 0.126 | benign | -0.386 | Destabilizing | 0.489 | N | 0.417 | neutral | N | 0.471565581 | None | None | I |
V/C | 0.5358 | ambiguous | 0.5564 | ambiguous | -0.577 | Destabilizing | 0.998 | D | 0.546 | neutral | None | None | None | None | I |
V/D | 0.2452 | likely_benign | 0.262 | benign | -0.268 | Destabilizing | 0.942 | D | 0.67 | neutral | N | 0.456193484 | None | None | I |
V/E | 0.1575 | likely_benign | 0.1683 | benign | -0.398 | Destabilizing | 0.956 | D | 0.579 | neutral | None | None | None | None | I |
V/F | 0.1401 | likely_benign | 0.1516 | benign | -0.731 | Destabilizing | 0.942 | D | 0.506 | neutral | N | 0.473125806 | None | None | I |
V/G | 0.1289 | likely_benign | 0.1409 | benign | -0.491 | Destabilizing | 0.822 | D | 0.609 | neutral | N | 0.486343033 | None | None | I |
V/H | 0.3812 | ambiguous | 0.4182 | ambiguous | -0.152 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | I |
V/I | 0.0721 | likely_benign | 0.0758 | benign | -0.268 | Destabilizing | 0.014 | N | 0.229 | neutral | N | 0.460292582 | None | None | I |
V/K | 0.1774 | likely_benign | 0.1885 | benign | -0.332 | Destabilizing | 0.956 | D | 0.584 | neutral | None | None | None | None | I |
V/L | 0.1564 | likely_benign | 0.1739 | benign | -0.268 | Destabilizing | 0.247 | N | 0.432 | neutral | N | 0.486516391 | None | None | I |
V/M | 0.0962 | likely_benign | 0.1044 | benign | -0.282 | Destabilizing | 0.956 | D | 0.481 | neutral | None | None | None | None | I |
V/N | 0.1572 | likely_benign | 0.1688 | benign | -0.06 | Destabilizing | 0.956 | D | 0.673 | neutral | None | None | None | None | I |
V/P | 0.6912 | likely_pathogenic | 0.7241 | pathogenic | -0.273 | Destabilizing | 0.978 | D | 0.643 | neutral | None | None | None | None | I |
V/Q | 0.1654 | likely_benign | 0.181 | benign | -0.329 | Destabilizing | 0.978 | D | 0.644 | neutral | None | None | None | None | I |
V/R | 0.189 | likely_benign | 0.1921 | benign | 0.17 | Stabilizing | 0.978 | D | 0.675 | neutral | None | None | None | None | I |
V/S | 0.1049 | likely_benign | 0.1128 | benign | -0.392 | Destabilizing | 0.193 | N | 0.399 | neutral | None | None | None | None | I |
V/T | 0.0982 | likely_benign | 0.1083 | benign | -0.425 | Destabilizing | 0.754 | D | 0.425 | neutral | None | None | None | None | I |
V/W | 0.6923 | likely_pathogenic | 0.7178 | pathogenic | -0.805 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
V/Y | 0.4168 | ambiguous | 0.433 | ambiguous | -0.491 | Destabilizing | 0.978 | D | 0.509 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.