Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31298 | 94117;94118;94119 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
N2AB | 29657 | 89194;89195;89196 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
N2A | 28730 | 86413;86414;86415 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
N2B | 22233 | 66922;66923;66924 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
Novex-1 | 22358 | 67297;67298;67299 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
Novex-2 | 22425 | 67498;67499;67500 | chr2:178547734;178547733;178547732 | chr2:179412461;179412460;179412459 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1697809647 | None | 0.999 | N | 0.539 | 0.47 | 0.468834750356 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1265 | likely_benign | 0.1498 | benign | -0.749 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.487039591 | None | None | N |
T/C | 0.5422 | ambiguous | 0.5833 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/D | 0.4406 | ambiguous | 0.502 | ambiguous | 0.647 | Stabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
T/E | 0.3741 | ambiguous | 0.4105 | ambiguous | 0.687 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
T/F | 0.4534 | ambiguous | 0.5224 | ambiguous | -0.917 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
T/G | 0.3591 | ambiguous | 0.4266 | ambiguous | -1.003 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/H | 0.3325 | likely_benign | 0.3768 | ambiguous | -1.052 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
T/I | 0.2537 | likely_benign | 0.2883 | benign | -0.162 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.528752589 | None | None | N |
T/K | 0.2956 | likely_benign | 0.327 | benign | -0.127 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.482862797 | None | None | N |
T/L | 0.1857 | likely_benign | 0.2179 | benign | -0.162 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/M | 0.1145 | likely_benign | 0.125 | benign | -0.189 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/N | 0.1318 | likely_benign | 0.1489 | benign | -0.244 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
T/P | 0.2813 | likely_benign | 0.3472 | ambiguous | -0.326 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.503702268 | None | None | N |
T/Q | 0.2724 | likely_benign | 0.3048 | benign | -0.24 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
T/R | 0.2694 | likely_benign | 0.3019 | benign | -0.054 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.519266315 | None | None | N |
T/S | 0.1308 | likely_benign | 0.143 | benign | -0.647 | Destabilizing | 0.999 | D | 0.522 | neutral | N | 0.450097018 | None | None | N |
T/V | 0.1948 | likely_benign | 0.2107 | benign | -0.326 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
T/W | 0.7779 | likely_pathogenic | 0.8226 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
T/Y | 0.3914 | ambiguous | 0.4375 | ambiguous | -0.582 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.