Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31299 | 94120;94121;94122 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
N2AB | 29658 | 89197;89198;89199 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
N2A | 28731 | 86416;86417;86418 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
N2B | 22234 | 66925;66926;66927 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
Novex-1 | 22359 | 67300;67301;67302 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
Novex-2 | 22426 | 67501;67502;67503 | chr2:178547731;178547730;178547729 | chr2:179412458;179412457;179412456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs1321285611 | -0.774 | 1.0 | N | 0.833 | 0.515 | 0.832015162006 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
F/L | None | None | 0.999 | N | 0.59 | 0.427 | 0.549164311151 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7904 | likely_pathogenic | 0.8038 | pathogenic | -1.535 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
F/C | 0.5269 | ambiguous | 0.5384 | ambiguous | -0.924 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.474240527 | None | None | I |
F/D | 0.9594 | likely_pathogenic | 0.9685 | pathogenic | 0.484 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
F/E | 0.9519 | likely_pathogenic | 0.9602 | pathogenic | 0.526 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
F/G | 0.9392 | likely_pathogenic | 0.9455 | pathogenic | -1.804 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
F/H | 0.7924 | likely_pathogenic | 0.8034 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
F/I | 0.4025 | ambiguous | 0.4366 | ambiguous | -0.78 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.484110804 | None | None | I |
F/K | 0.966 | likely_pathogenic | 0.969 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
F/L | 0.9312 | likely_pathogenic | 0.9401 | pathogenic | -0.78 | Destabilizing | 0.999 | D | 0.59 | neutral | N | 0.447747359 | None | None | I |
F/M | 0.7234 | likely_pathogenic | 0.7413 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
F/N | 0.9067 | likely_pathogenic | 0.9147 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
F/P | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
F/Q | 0.9255 | likely_pathogenic | 0.9356 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
F/R | 0.9307 | likely_pathogenic | 0.936 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
F/S | 0.7484 | likely_pathogenic | 0.7652 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.456961488 | None | None | I |
F/T | 0.8043 | likely_pathogenic | 0.8202 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
F/V | 0.35 | ambiguous | 0.3781 | ambiguous | -1.017 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.452441103 | None | None | I |
F/W | 0.7321 | likely_pathogenic | 0.7524 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
F/Y | 0.2629 | likely_benign | 0.2656 | benign | -0.328 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.518300735 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.