Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31300 | 94123;94124;94125 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
N2AB | 29659 | 89200;89201;89202 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
N2A | 28732 | 86419;86420;86421 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
N2B | 22235 | 66928;66929;66930 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
Novex-1 | 22360 | 67303;67304;67305 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
Novex-2 | 22427 | 67504;67505;67506 | chr2:178547728;178547727;178547726 | chr2:179412455;179412454;179412453 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.01 | N | 0.267 | 0.303 | 0.303123707472 | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8578E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0669 | likely_benign | 0.0635 | benign | -0.688 | Destabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
S/C | 0.1086 | likely_benign | 0.1115 | benign | -0.396 | Destabilizing | 0.295 | N | 0.535 | neutral | N | 0.504485509 | None | None | N |
S/D | 0.3174 | likely_benign | 0.2733 | benign | 0.418 | Stabilizing | 0.031 | N | 0.347 | neutral | None | None | None | None | N |
S/E | 0.3487 | ambiguous | 0.2985 | benign | 0.428 | Stabilizing | 0.031 | N | 0.354 | neutral | None | None | None | None | N |
S/F | 0.1597 | likely_benign | 0.1689 | benign | -0.812 | Destabilizing | 0.072 | N | 0.659 | neutral | None | None | None | None | N |
S/G | 0.1115 | likely_benign | 0.1007 | benign | -0.94 | Destabilizing | 0.01 | N | 0.267 | neutral | N | 0.503218061 | None | None | N |
S/H | 0.2708 | likely_benign | 0.2478 | benign | -1.278 | Destabilizing | 0.628 | D | 0.545 | neutral | None | None | None | None | N |
S/I | 0.1089 | likely_benign | 0.1226 | benign | -0.12 | Destabilizing | None | N | 0.283 | neutral | D | 0.530963388 | None | None | N |
S/K | 0.5346 | ambiguous | 0.4628 | ambiguous | -0.392 | Destabilizing | 0.031 | N | 0.351 | neutral | None | None | None | None | N |
S/L | 0.0779 | likely_benign | 0.0801 | benign | -0.12 | Destabilizing | 0.007 | N | 0.358 | neutral | None | None | None | None | N |
S/M | 0.1236 | likely_benign | 0.1179 | benign | -0.042 | Destabilizing | 0.356 | N | 0.547 | neutral | None | None | None | None | N |
S/N | 0.1207 | likely_benign | 0.1085 | benign | -0.322 | Destabilizing | 0.024 | N | 0.36 | neutral | N | 0.500640481 | None | None | N |
S/P | 0.1284 | likely_benign | 0.0971 | benign | -0.275 | Destabilizing | 0.136 | N | 0.513 | neutral | None | None | None | None | N |
S/Q | 0.3957 | ambiguous | 0.3375 | benign | -0.402 | Destabilizing | 0.136 | N | 0.467 | neutral | None | None | None | None | N |
S/R | 0.459 | ambiguous | 0.4017 | ambiguous | -0.38 | Destabilizing | 0.13 | N | 0.547 | neutral | N | 0.514839143 | None | None | N |
S/T | 0.0577 | likely_benign | 0.0597 | benign | -0.415 | Destabilizing | None | N | 0.111 | neutral | N | 0.442149538 | None | None | N |
S/V | 0.1201 | likely_benign | 0.1196 | benign | -0.275 | Destabilizing | 0.003 | N | 0.361 | neutral | None | None | None | None | N |
S/W | 0.2691 | likely_benign | 0.2873 | benign | -0.773 | Destabilizing | 0.864 | D | 0.611 | neutral | None | None | None | None | N |
S/Y | 0.1673 | likely_benign | 0.1692 | benign | -0.497 | Destabilizing | 0.356 | N | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.