Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31317 | 94174;94175;94176 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
N2AB | 29676 | 89251;89252;89253 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
N2A | 28749 | 86470;86471;86472 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
N2B | 22252 | 66979;66980;66981 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
Novex-1 | 22377 | 67354;67355;67356 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
Novex-2 | 22444 | 67555;67556;67557 | chr2:178547677;178547676;178547675 | chr2:179412404;179412403;179412402 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.008 | N | 0.338 | 0.115 | 0.197625483188 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1162 | likely_benign | 0.1274 | benign | -0.39 | Destabilizing | 0.565 | D | 0.614 | neutral | N | 0.466671523 | None | None | N |
E/C | 0.6234 | likely_pathogenic | 0.6798 | pathogenic | -0.024 | Destabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.1146 | likely_benign | 0.1119 | benign | -0.418 | Destabilizing | 0.003 | N | 0.169 | neutral | N | 0.514113132 | None | None | N |
E/F | 0.5698 | likely_pathogenic | 0.6166 | pathogenic | -0.222 | Destabilizing | 0.987 | D | 0.765 | deleterious | None | None | None | None | N |
E/G | 0.1852 | likely_benign | 0.2236 | benign | -0.599 | Destabilizing | 0.722 | D | 0.627 | neutral | N | 0.478788297 | None | None | N |
E/H | 0.2471 | likely_benign | 0.2675 | benign | -0.029 | Destabilizing | 0.989 | D | 0.583 | neutral | None | None | None | None | N |
E/I | 0.1862 | likely_benign | 0.196 | benign | 0.13 | Stabilizing | 0.961 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.0932 | likely_benign | 0.1178 | benign | 0.402 | Stabilizing | 0.008 | N | 0.338 | neutral | N | 0.475861388 | None | None | N |
E/L | 0.2203 | likely_benign | 0.2478 | benign | 0.13 | Stabilizing | 0.923 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/M | 0.272 | likely_benign | 0.3035 | benign | 0.229 | Stabilizing | 0.996 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.1651 | likely_benign | 0.172 | benign | -0.016 | Destabilizing | 0.633 | D | 0.572 | neutral | None | None | None | None | N |
E/P | 0.8204 | likely_pathogenic | 0.8243 | pathogenic | -0.023 | Destabilizing | 0.961 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/Q | 0.1006 | likely_benign | 0.1091 | benign | 0.03 | Stabilizing | 0.722 | D | 0.565 | neutral | N | 0.488753328 | None | None | N |
E/R | 0.1579 | likely_benign | 0.188 | benign | 0.58 | Stabilizing | 0.858 | D | 0.577 | neutral | None | None | None | None | N |
E/S | 0.1399 | likely_benign | 0.1471 | benign | -0.147 | Destabilizing | 0.775 | D | 0.539 | neutral | None | None | None | None | N |
E/T | 0.1292 | likely_benign | 0.1303 | benign | 0.03 | Stabilizing | 0.923 | D | 0.667 | neutral | None | None | None | None | N |
E/V | 0.1169 | likely_benign | 0.1182 | benign | -0.023 | Destabilizing | 0.901 | D | 0.685 | prob.neutral | N | 0.494103219 | None | None | N |
E/W | 0.7833 | likely_pathogenic | 0.8306 | pathogenic | -0.048 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.4357 | ambiguous | 0.4659 | ambiguous | 0.035 | Stabilizing | 0.987 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.