Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3132 | 9619;9620;9621 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
N2AB | 3132 | 9619;9620;9621 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
N2A | 3132 | 9619;9620;9621 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
N2B | 3086 | 9481;9482;9483 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
Novex-1 | 3086 | 9481;9482;9483 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
Novex-2 | 3086 | 9481;9482;9483 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
Novex-3 | 3132 | 9619;9620;9621 | chr2:178767836;178767835;178767834 | chr2:179632563;179632562;179632561 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1293502713 | None | 1.0 | N | 0.815 | 0.537 | 0.301789629655 | gnomAD-4.0.0 | 1.59052E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3503 | ambiguous | 0.4237 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.668 | neutral | N | 0.429050617 | None | None | I |
G/C | 0.6733 | likely_pathogenic | 0.7464 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
G/D | 0.8724 | likely_pathogenic | 0.9009 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
G/E | 0.8994 | likely_pathogenic | 0.922 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.348360382 | None | None | I |
G/F | 0.9559 | likely_pathogenic | 0.973 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
G/H | 0.9336 | likely_pathogenic | 0.9547 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
G/I | 0.948 | likely_pathogenic | 0.9675 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
G/K | 0.9524 | likely_pathogenic | 0.962 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/L | 0.8878 | likely_pathogenic | 0.9276 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
G/M | 0.9226 | likely_pathogenic | 0.9524 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
G/N | 0.8324 | likely_pathogenic | 0.8869 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
G/P | 0.9914 | likely_pathogenic | 0.9926 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/Q | 0.877 | likely_pathogenic | 0.906 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
G/R | 0.8642 | likely_pathogenic | 0.8886 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.792 | deleterious | N | 0.386252899 | None | None | I |
G/S | 0.3335 | likely_benign | 0.4273 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
G/T | 0.8218 | likely_pathogenic | 0.8847 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/V | 0.8686 | likely_pathogenic | 0.9137 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.778 | deleterious | N | 0.44501285 | None | None | I |
G/W | 0.933 | likely_pathogenic | 0.9529 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
G/Y | 0.9395 | likely_pathogenic | 0.9595 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.