Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31328 | 94207;94208;94209 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
N2AB | 29687 | 89284;89285;89286 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
N2A | 28760 | 86503;86504;86505 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
N2B | 22263 | 67012;67013;67014 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
Novex-1 | 22388 | 67387;67388;67389 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
Novex-2 | 22455 | 67588;67589;67590 | chr2:178547644;178547643;178547642 | chr2:179412371;179412370;179412369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs754710293 | -1.744 | 1.0 | D | 0.837 | 0.797 | 0.830618923432 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
L/R | rs754710293 | -1.744 | 1.0 | D | 0.837 | 0.797 | 0.830618923432 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9567 | likely_pathogenic | 0.9353 | pathogenic | -2.395 | Highly Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
L/C | 0.8834 | likely_pathogenic | 0.8513 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -3.035 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/E | 0.9984 | likely_pathogenic | 0.9974 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.376 | ambiguous | 0.4494 | ambiguous | -1.425 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
L/G | 0.9954 | likely_pathogenic | 0.9922 | pathogenic | -3.021 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/H | 0.9944 | likely_pathogenic | 0.992 | pathogenic | -2.83 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/I | 0.1132 | likely_benign | 0.1113 | benign | -0.529 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
L/K | 0.997 | likely_pathogenic | 0.9956 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/M | 0.2773 | likely_benign | 0.2806 | benign | -0.649 | Destabilizing | 1.0 | D | 0.675 | neutral | N | 0.49736503 | None | None | N |
L/N | 0.9987 | likely_pathogenic | 0.9976 | pathogenic | -2.527 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/P | 0.9974 | likely_pathogenic | 0.9951 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.543715305 | None | None | N |
L/Q | 0.9927 | likely_pathogenic | 0.9889 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.543715305 | None | None | N |
L/R | 0.9927 | likely_pathogenic | 0.9903 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.543715305 | None | None | N |
L/S | 0.9958 | likely_pathogenic | 0.993 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
L/T | 0.9814 | likely_pathogenic | 0.9663 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/V | 0.1746 | likely_benign | 0.1566 | benign | -1.139 | Destabilizing | 0.999 | D | 0.558 | neutral | N | 0.498263819 | None | None | N |
L/W | 0.9655 | likely_pathogenic | 0.9649 | pathogenic | -1.881 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/Y | 0.9669 | likely_pathogenic | 0.9626 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.