Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31332 | 94219;94220;94221 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
N2AB | 29691 | 89296;89297;89298 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
N2A | 28764 | 86515;86516;86517 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
N2B | 22267 | 67024;67025;67026 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
Novex-1 | 22392 | 67399;67400;67401 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
Novex-2 | 22459 | 67600;67601;67602 | chr2:178547632;178547631;178547630 | chr2:179412359;179412358;179412357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs766706869 | 0.211 | 0.999 | N | 0.69 | 0.358 | 0.424549175451 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
E/V | rs766706869 | 0.211 | 0.999 | N | 0.69 | 0.358 | 0.424549175451 | gnomAD-4.0.0 | 9.54675E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57437E-06 | 4.29812E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1275 | likely_benign | 0.1232 | benign | -0.379 | Destabilizing | 0.996 | D | 0.607 | neutral | N | 0.40744424 | None | None | N |
E/C | 0.7566 | likely_pathogenic | 0.7481 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
E/D | 0.1582 | likely_benign | 0.1588 | benign | -0.872 | Destabilizing | 0.998 | D | 0.555 | neutral | N | 0.517500154 | None | None | N |
E/F | 0.6698 | likely_pathogenic | 0.6712 | pathogenic | 0.324 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/G | 0.2377 | likely_benign | 0.2441 | benign | -0.725 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.455027543 | None | None | N |
E/H | 0.4916 | ambiguous | 0.4751 | ambiguous | 0.414 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/I | 0.222 | likely_benign | 0.2089 | benign | 0.548 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.1357 | likely_benign | 0.1312 | benign | 0.07 | Stabilizing | 0.998 | D | 0.587 | neutral | N | 0.439788732 | None | None | N |
E/L | 0.277 | likely_benign | 0.2629 | benign | 0.548 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/M | 0.3405 | ambiguous | 0.3278 | benign | 0.654 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.299 | likely_benign | 0.3016 | benign | -0.671 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/P | 0.2374 | likely_benign | 0.2106 | benign | 0.262 | Stabilizing | 0.504 | D | 0.392 | neutral | None | None | None | None | N |
E/Q | 0.1362 | likely_benign | 0.129 | benign | -0.498 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.466609974 | None | None | N |
E/R | 0.2566 | likely_benign | 0.2362 | benign | 0.436 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/S | 0.2078 | likely_benign | 0.2086 | benign | -0.861 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | N |
E/T | 0.2249 | likely_benign | 0.2185 | benign | -0.551 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/V | 0.1476 | likely_benign | 0.1369 | benign | 0.262 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.452160596 | None | None | N |
E/W | 0.9157 | likely_pathogenic | 0.9166 | pathogenic | 0.608 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/Y | 0.5749 | likely_pathogenic | 0.5914 | pathogenic | 0.619 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.