Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31336 | 94231;94232;94233 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
N2AB | 29695 | 89308;89309;89310 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
N2A | 28768 | 86527;86528;86529 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
N2B | 22271 | 67036;67037;67038 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
Novex-1 | 22396 | 67411;67412;67413 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
Novex-2 | 22463 | 67612;67613;67614 | chr2:178547620;178547619;178547618 | chr2:179412347;179412346;179412345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.001 | N | 0.486 | 0.11 | 0.256283259241 | gnomAD-4.0.0 | 3.18214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.079 | likely_benign | 0.088 | benign | -0.579 | Destabilizing | 0.001 | N | 0.188 | neutral | N | 0.375641253 | None | None | N |
G/C | 0.1494 | likely_benign | 0.1734 | benign | -1.021 | Destabilizing | 0.316 | N | 0.599 | neutral | None | None | None | None | N |
G/D | 0.0482 | likely_benign | 0.0433 | benign | -1.073 | Destabilizing | None | N | 0.182 | neutral | None | None | None | None | N |
G/E | 0.1328 | likely_benign | 0.1631 | benign | -1.213 | Destabilizing | None | N | 0.215 | neutral | N | 0.38158579 | None | None | N |
G/F | 0.4209 | ambiguous | 0.4957 | ambiguous | -1.344 | Destabilizing | 0.051 | N | 0.588 | neutral | None | None | None | None | N |
G/H | 0.2498 | likely_benign | 0.2672 | benign | -0.882 | Destabilizing | 0.009 | N | 0.559 | neutral | None | None | None | None | N |
G/I | 0.1734 | likely_benign | 0.189 | benign | -0.6 | Destabilizing | 0.008 | N | 0.569 | neutral | None | None | None | None | N |
G/K | 0.3334 | likely_benign | 0.3721 | ambiguous | -0.877 | Destabilizing | None | N | 0.271 | neutral | None | None | None | None | N |
G/L | 0.25 | likely_benign | 0.2938 | benign | -0.6 | Destabilizing | 0.002 | N | 0.501 | neutral | None | None | None | None | N |
G/M | 0.3219 | likely_benign | 0.3589 | ambiguous | -0.459 | Destabilizing | 0.116 | N | 0.583 | neutral | None | None | None | None | N |
G/N | 0.0751 | likely_benign | 0.0689 | benign | -0.596 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
G/P | 0.5984 | likely_pathogenic | 0.6563 | pathogenic | -0.56 | Destabilizing | 0.003 | N | 0.477 | neutral | None | None | None | None | N |
G/Q | 0.235 | likely_benign | 0.2801 | benign | -0.939 | Destabilizing | 0.002 | N | 0.478 | neutral | None | None | None | None | N |
G/R | 0.2603 | likely_benign | 0.3138 | benign | -0.453 | Destabilizing | 0.001 | N | 0.486 | neutral | N | 0.379124275 | None | None | N |
G/S | 0.0547 | likely_benign | 0.0538 | benign | -0.756 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
G/T | 0.0779 | likely_benign | 0.0763 | benign | -0.835 | Destabilizing | None | N | 0.266 | neutral | None | None | None | None | N |
G/V | 0.1155 | likely_benign | 0.133 | benign | -0.56 | Destabilizing | 0.003 | N | 0.51 | neutral | N | 0.436593711 | None | None | N |
G/W | 0.4701 | ambiguous | 0.5503 | ambiguous | -1.487 | Destabilizing | 0.316 | N | 0.563 | neutral | None | None | None | None | N |
G/Y | 0.2343 | likely_benign | 0.2511 | benign | -1.117 | Destabilizing | 0.051 | N | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.