Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31347 | 94264;94265;94266 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
N2AB | 29706 | 89341;89342;89343 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
N2A | 28779 | 86560;86561;86562 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
N2B | 22282 | 67069;67070;67071 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
Novex-1 | 22407 | 67444;67445;67446 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
Novex-2 | 22474 | 67645;67646;67647 | chr2:178547587;178547586;178547585 | chr2:179412314;179412313;179412312 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs886055230 | None | 1.0 | N | 0.779 | 0.287 | 0.270001397563 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs886055230 | None | 1.0 | N | 0.779 | 0.287 | 0.270001397563 | gnomAD-4.0.0 | 1.79338E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.39526E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8896 | likely_pathogenic | 0.9084 | pathogenic | -1.756 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | D | 0.533051837 | None | None | N |
E/C | 0.9801 | likely_pathogenic | 0.9822 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/D | 0.9067 | likely_pathogenic | 0.9173 | pathogenic | -1.666 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.475207126 | None | None | N |
E/F | 0.9884 | likely_pathogenic | 0.9912 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
E/G | 0.9172 | likely_pathogenic | 0.9293 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.511949069 | None | None | N |
E/H | 0.9543 | likely_pathogenic | 0.9592 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/I | 0.9808 | likely_pathogenic | 0.9853 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
E/K | 0.9093 | likely_pathogenic | 0.9252 | pathogenic | -1.489 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.520428084 | None | None | N |
E/L | 0.9401 | likely_pathogenic | 0.956 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
E/M | 0.9452 | likely_pathogenic | 0.9577 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/N | 0.9781 | likely_pathogenic | 0.9809 | pathogenic | -1.683 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/Q | 0.4955 | ambiguous | 0.5187 | ambiguous | -1.431 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.501991984 | None | None | N |
E/R | 0.936 | likely_pathogenic | 0.9414 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/S | 0.9092 | likely_pathogenic | 0.9198 | pathogenic | -2.359 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
E/T | 0.9656 | likely_pathogenic | 0.9685 | pathogenic | -1.988 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.9466 | likely_pathogenic | 0.9578 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.51093511 | None | None | N |
E/W | 0.9918 | likely_pathogenic | 0.9933 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/Y | 0.9772 | likely_pathogenic | 0.9832 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.