Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3134994270;94271;94272 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
N2AB2970889347;89348;89349 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
N2A2878186566;86567;86568 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
N2B2228467075;67076;67077 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
Novex-12240967450;67451;67452 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
Novex-22247667651;67652;67653 chr2:178547581;178547580;178547579chr2:179412308;179412307;179412306
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-116
  • Domain position: 42
  • Structural Position: 43
  • Q(SASA): 0.3823
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs727503549 -2.001 1.0 N 0.845 0.499 0.65667953858 gnomAD-2.1.1 8.93E-05 None None None None N None 0 0 None 3.87222E-04 1.02617E-04 None 4.24809E-04 None 1.19894E-04 7.82E-06 2.80899E-04
R/C rs727503549 -2.001 1.0 N 0.845 0.499 0.65667953858 gnomAD-3.1.2 2.63E-05 None None None None N None 0 0 0 0 0 None 9.43E-05 0 1.47E-05 2.07383E-04 4.78011E-04
R/C rs727503549 -2.001 1.0 N 0.845 0.499 0.65667953858 gnomAD-4.0.0 5.32947E-05 None None None None N None 0 0 None 3.71622E-04 2.89842E-04 None 7.81128E-05 0 1.61042E-05 3.73298E-04 6.4043E-05
R/G rs727503549 -2.66 1.0 N 0.779 0.559 0.629010756219 gnomAD-2.1.1 4.02E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
R/H rs181104321 -2.395 1.0 N 0.715 0.405 None gnomAD-2.1.1 2.22519E-03 None None None None N None 2.76951E-03 7.36002E-04 None 0 0 None 3.27E-05 None 1.41487E-02 1.22756E-03 2.5288E-03
R/H rs181104321 -2.395 1.0 N 0.715 0.405 None gnomAD-3.1.2 2.64279E-03 None None None None N None 2.99329E-03 1.57377E-03 0 0 0 None 1.51658E-02 0 1.30836E-03 2.07039E-04 1.43403E-03
R/H rs181104321 -2.395 1.0 N 0.715 0.405 None 1000 genomes 1.19808E-03 None None None None N None 8E-04 1.4E-03 None None 0 4E-03 None None None 0 None
R/H rs181104321 -2.395 1.0 N 0.715 0.405 None gnomAD-4.0.0 1.71084E-03 None None None None N None 2.81243E-03 9.66925E-04 None 0 0 None 1.32006E-02 3.29924E-04 1.32223E-03 1.09789E-04 1.20035E-03
R/L rs181104321 -1.325 1.0 N 0.779 0.475 0.565757058302 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.89E-06 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.9698 likely_pathogenic 0.9566 pathogenic -2.086 Highly Destabilizing 0.999 D 0.627 neutral None None None None N
R/C 0.521 ambiguous 0.4975 ambiguous -2.066 Highly Destabilizing 1.0 D 0.845 deleterious N 0.514750637 None None N
R/D 0.9964 likely_pathogenic 0.9941 pathogenic -0.787 Destabilizing 1.0 D 0.857 deleterious None None None None N
R/E 0.9402 likely_pathogenic 0.9143 pathogenic -0.62 Destabilizing 0.999 D 0.607 neutral None None None None N
R/F 0.9758 likely_pathogenic 0.9673 pathogenic -1.736 Destabilizing 1.0 D 0.826 deleterious None None None None N
R/G 0.9426 likely_pathogenic 0.9167 pathogenic -2.399 Highly Destabilizing 1.0 D 0.779 deleterious N 0.508808743 None None N
R/H 0.5146 ambiguous 0.504 ambiguous -2.302 Highly Destabilizing 1.0 D 0.715 prob.delet. N 0.497959417 None None N
R/I 0.9418 likely_pathogenic 0.9268 pathogenic -1.195 Destabilizing 1.0 D 0.847 deleterious None None None None N
R/K 0.2811 likely_benign 0.2501 benign -1.651 Destabilizing 0.998 D 0.467 neutral None None None None N
R/L 0.8767 likely_pathogenic 0.8432 pathogenic -1.195 Destabilizing 1.0 D 0.779 deleterious N 0.514057204 None None N
R/M 0.8651 likely_pathogenic 0.8185 pathogenic -1.463 Destabilizing 1.0 D 0.809 deleterious None None None None N
R/N 0.9855 likely_pathogenic 0.9792 pathogenic -1.251 Destabilizing 1.0 D 0.721 prob.delet. None None None None N
R/P 0.9992 likely_pathogenic 0.9987 pathogenic -1.479 Destabilizing 1.0 D 0.847 deleterious N 0.509062233 None None N
R/Q 0.3208 likely_benign 0.2677 benign -1.397 Destabilizing 1.0 D 0.698 prob.neutral None None None None N
R/S 0.9843 likely_pathogenic 0.9763 pathogenic -2.309 Highly Destabilizing 1.0 D 0.807 deleterious D 0.522463256 None None N
R/T 0.9625 likely_pathogenic 0.9409 pathogenic -1.942 Destabilizing 1.0 D 0.795 deleterious None None None None N
R/V 0.9477 likely_pathogenic 0.9295 pathogenic -1.479 Destabilizing 1.0 D 0.853 deleterious None None None None N
R/W 0.7864 likely_pathogenic 0.7253 pathogenic -1.169 Destabilizing 1.0 D 0.83 deleterious None None None None N
R/Y 0.9234 likely_pathogenic 0.9034 pathogenic -0.99 Destabilizing 1.0 D 0.857 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.