Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31350 | 94273;94274;94275 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
N2AB | 29709 | 89350;89351;89352 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
N2A | 28782 | 86569;86570;86571 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
N2B | 22285 | 67078;67079;67080 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
Novex-1 | 22410 | 67453;67454;67455 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
Novex-2 | 22477 | 67654;67655;67656 | chr2:178547578;178547577;178547576 | chr2:179412305;179412304;179412303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.616 | 0.333 | 0.4018988957 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3845 | ambiguous | 0.3656 | ambiguous | -0.895 | Destabilizing | 0.999 | D | 0.665 | neutral | D | 0.526004994 | None | None | N |
E/C | 0.9509 | likely_pathogenic | 0.9409 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/D | 0.3464 | ambiguous | 0.3397 | benign | -1.201 | Destabilizing | 0.999 | D | 0.443 | neutral | N | 0.418357454 | None | None | N |
E/F | 0.9594 | likely_pathogenic | 0.9579 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/G | 0.5506 | ambiguous | 0.5169 | ambiguous | -1.276 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.475398164 | None | None | N |
E/H | 0.8801 | likely_pathogenic | 0.8593 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
E/I | 0.7202 | likely_pathogenic | 0.7165 | pathogenic | 0.151 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.5697 | likely_pathogenic | 0.5584 | ambiguous | -0.672 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.501895983 | None | None | N |
E/L | 0.7199 | likely_pathogenic | 0.7199 | pathogenic | 0.151 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/M | 0.7759 | likely_pathogenic | 0.7697 | pathogenic | 0.636 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/N | 0.6745 | likely_pathogenic | 0.6736 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/P | 0.7679 | likely_pathogenic | 0.7827 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Q | 0.3574 | ambiguous | 0.3315 | benign | -1.016 | Destabilizing | 1.0 | D | 0.616 | neutral | N | 0.516980079 | None | None | N |
E/R | 0.7349 | likely_pathogenic | 0.7119 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/S | 0.5757 | likely_pathogenic | 0.5584 | ambiguous | -1.491 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
E/T | 0.6589 | likely_pathogenic | 0.6408 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/V | 0.5104 | ambiguous | 0.5021 | ambiguous | -0.176 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.472435649 | None | None | N |
E/W | 0.9892 | likely_pathogenic | 0.9875 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/Y | 0.9407 | likely_pathogenic | 0.9341 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.