Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31358 | 94297;94298;94299 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
N2AB | 29717 | 89374;89375;89376 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
N2A | 28790 | 86593;86594;86595 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
N2B | 22293 | 67102;67103;67104 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
Novex-1 | 22418 | 67477;67478;67479 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
Novex-2 | 22485 | 67678;67679;67680 | chr2:178547554;178547553;178547552 | chr2:179412281;179412280;179412279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.997 | N | 0.657 | 0.225 | 0.651092396515 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4615 | ambiguous | 0.4671 | ambiguous | -1.204 | Destabilizing | 0.983 | D | 0.509 | neutral | None | None | None | None | N |
L/C | 0.6673 | likely_pathogenic | 0.6706 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/D | 0.9182 | likely_pathogenic | 0.9206 | pathogenic | -0.701 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
L/E | 0.6722 | likely_pathogenic | 0.6734 | pathogenic | -0.772 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
L/F | 0.442 | ambiguous | 0.4567 | ambiguous | -1.019 | Destabilizing | 0.997 | D | 0.657 | neutral | N | 0.485041019 | None | None | N |
L/G | 0.8245 | likely_pathogenic | 0.816 | pathogenic | -1.435 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
L/H | 0.5699 | likely_pathogenic | 0.5542 | ambiguous | -0.647 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.493831073 | None | None | N |
L/I | 0.1101 | likely_benign | 0.1255 | benign | -0.688 | Destabilizing | 0.9 | D | 0.424 | neutral | N | 0.468706129 | None | None | N |
L/K | 0.5464 | ambiguous | 0.5041 | ambiguous | -0.775 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
L/M | 0.1347 | likely_benign | 0.14 | benign | -0.477 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
L/N | 0.6527 | likely_pathogenic | 0.6643 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
L/P | 0.4185 | ambiguous | 0.3784 | ambiguous | -0.827 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.435324274 | None | None | N |
L/Q | 0.3709 | ambiguous | 0.3556 | ambiguous | -0.761 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/R | 0.4643 | ambiguous | 0.4326 | ambiguous | -0.106 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.436073636 | None | None | N |
L/S | 0.6772 | likely_pathogenic | 0.7073 | pathogenic | -1.002 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/T | 0.3092 | likely_benign | 0.341 | ambiguous | -0.968 | Destabilizing | 0.983 | D | 0.627 | neutral | None | None | None | None | N |
L/V | 0.1044 | likely_benign | 0.111 | benign | -0.827 | Destabilizing | 0.198 | N | 0.227 | neutral | N | 0.400691626 | None | None | N |
L/W | 0.6257 | likely_pathogenic | 0.6097 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/Y | 0.7058 | likely_pathogenic | 0.7105 | pathogenic | -0.807 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.