Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31362 | 94309;94310;94311 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
N2AB | 29721 | 89386;89387;89388 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
N2A | 28794 | 86605;86606;86607 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
N2B | 22297 | 67114;67115;67116 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
Novex-1 | 22422 | 67489;67490;67491 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
Novex-2 | 22489 | 67690;67691;67692 | chr2:178547542;178547541;178547540 | chr2:179412269;179412268;179412267 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.999 | N | 0.554 | 0.292 | 0.243398259712 | gnomAD-4.0.0 | 3.42112E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.4973E-06 | 0 | 0 |
S/R | None | None | 1.0 | N | 0.787 | 0.511 | 0.318252033908 | gnomAD-4.0.0 | 6.84218E-07 | None | None | None | None | I | None | 0 | 2.23654E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1472 | likely_benign | 0.1159 | benign | -0.471 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | I |
S/C | 0.2564 | likely_benign | 0.1833 | benign | -0.286 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.49385804 | None | None | I |
S/D | 0.954 | likely_pathogenic | 0.9301 | pathogenic | -0.123 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
S/E | 0.9675 | likely_pathogenic | 0.9483 | pathogenic | -0.221 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
S/F | 0.7675 | likely_pathogenic | 0.6535 | pathogenic | -1.073 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
S/G | 0.2937 | likely_benign | 0.2134 | benign | -0.58 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.474192094 | None | None | I |
S/H | 0.8725 | likely_pathogenic | 0.8056 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
S/I | 0.7615 | likely_pathogenic | 0.6598 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.49385804 | None | None | I |
S/K | 0.9898 | likely_pathogenic | 0.9815 | pathogenic | -0.563 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
S/L | 0.3607 | ambiguous | 0.2785 | benign | -0.312 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
S/M | 0.5172 | ambiguous | 0.4302 | ambiguous | 0.085 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
S/N | 0.6518 | likely_pathogenic | 0.5686 | pathogenic | -0.299 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.499223824 | None | None | I |
S/P | 0.9669 | likely_pathogenic | 0.9328 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
S/Q | 0.9175 | likely_pathogenic | 0.877 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
S/R | 0.9776 | likely_pathogenic | 0.9607 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.496087519 | None | None | I |
S/T | 0.2183 | likely_benign | 0.1668 | benign | -0.403 | Destabilizing | 0.999 | D | 0.532 | neutral | N | 0.454816899 | None | None | I |
S/V | 0.6366 | likely_pathogenic | 0.5144 | ambiguous | -0.337 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
S/W | 0.8782 | likely_pathogenic | 0.8129 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
S/Y | 0.7409 | likely_pathogenic | 0.6298 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.