Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31370 | 94333;94334;94335 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
N2AB | 29729 | 89410;89411;89412 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
N2A | 28802 | 86629;86630;86631 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
N2B | 22305 | 67138;67139;67140 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
Novex-1 | 22430 | 67513;67514;67515 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
Novex-2 | 22497 | 67714;67715;67716 | chr2:178547518;178547517;178547516 | chr2:179412245;179412244;179412243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs568049899 | -0.398 | 0.114 | N | 0.582 | 0.131 | 0.413761986042 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs568049899 | -0.398 | 0.114 | N | 0.582 | 0.131 | 0.413761986042 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
V/L | rs568049899 | -0.398 | 0.114 | N | 0.582 | 0.131 | 0.413761986042 | gnomAD-4.0.0 | 6.56685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7629 | likely_pathogenic | 0.7594 | pathogenic | -1.844 | Destabilizing | 0.645 | D | 0.641 | neutral | N | 0.48227838 | None | None | N |
V/C | 0.9482 | likely_pathogenic | 0.9463 | pathogenic | -1.461 | Destabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9973 | likely_pathogenic | 0.9956 | pathogenic | -2.135 | Highly Destabilizing | 0.928 | D | 0.832 | deleterious | N | 0.50219306 | None | None | N |
V/E | 0.99 | likely_pathogenic | 0.9847 | pathogenic | -1.912 | Destabilizing | 0.981 | D | 0.808 | deleterious | None | None | None | None | N |
V/F | 0.8315 | likely_pathogenic | 0.7921 | pathogenic | -1.075 | Destabilizing | 0.864 | D | 0.768 | deleterious | N | 0.50886165 | None | None | N |
V/G | 0.9356 | likely_pathogenic | 0.9235 | pathogenic | -2.389 | Highly Destabilizing | 0.928 | D | 0.838 | deleterious | D | 0.539162039 | None | None | N |
V/H | 0.9969 | likely_pathogenic | 0.995 | pathogenic | -2.077 | Highly Destabilizing | 0.995 | D | 0.84 | deleterious | None | None | None | None | N |
V/I | 0.105 | likely_benign | 0.101 | benign | -0.333 | Destabilizing | 0.006 | N | 0.177 | neutral | N | 0.492220494 | None | None | N |
V/K | 0.9945 | likely_pathogenic | 0.9919 | pathogenic | -1.602 | Destabilizing | 0.945 | D | 0.812 | deleterious | None | None | None | None | N |
V/L | 0.732 | likely_pathogenic | 0.6911 | pathogenic | -0.333 | Destabilizing | 0.114 | N | 0.582 | neutral | N | 0.464403344 | None | None | N |
V/M | 0.675 | likely_pathogenic | 0.6359 | pathogenic | -0.406 | Destabilizing | 0.894 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/N | 0.9892 | likely_pathogenic | 0.9843 | pathogenic | -1.92 | Destabilizing | 0.981 | D | 0.868 | deleterious | None | None | None | None | N |
V/P | 0.9916 | likely_pathogenic | 0.9895 | pathogenic | -0.807 | Destabilizing | 0.981 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9902 | likely_pathogenic | 0.9857 | pathogenic | -1.732 | Destabilizing | 0.981 | D | 0.847 | deleterious | None | None | None | None | N |
V/R | 0.9915 | likely_pathogenic | 0.9878 | pathogenic | -1.494 | Destabilizing | 0.945 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9584 | likely_pathogenic | 0.9501 | pathogenic | -2.581 | Highly Destabilizing | 0.945 | D | 0.812 | deleterious | None | None | None | None | N |
V/T | 0.9171 | likely_pathogenic | 0.9016 | pathogenic | -2.194 | Highly Destabilizing | 0.707 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.9974 | likely_pathogenic | 0.9961 | pathogenic | -1.531 | Destabilizing | 0.995 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.9827 | likely_pathogenic | 0.9762 | pathogenic | -1.117 | Destabilizing | 0.945 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.