Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31372 | 94339;94340;94341 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
N2AB | 29731 | 89416;89417;89418 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
N2A | 28804 | 86635;86636;86637 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
N2B | 22307 | 67144;67145;67146 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
Novex-1 | 22432 | 67519;67520;67521 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
Novex-2 | 22499 | 67720;67721;67722 | chr2:178547512;178547511;178547510 | chr2:179412239;179412238;179412237 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs761630773 | 0.729 | 0.968 | N | 0.521 | 0.319 | 0.347659731818 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
H/L | rs761630773 | 0.729 | 0.968 | N | 0.521 | 0.319 | 0.347659731818 | gnomAD-4.0.0 | 2.0529E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 1.65689E-05 |
H/R | rs761630773 | -0.054 | 0.026 | N | 0.279 | 0.176 | 0.168933306366 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 8.71E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs761630773 | -0.054 | 0.026 | N | 0.279 | 0.176 | 0.168933306366 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | I | None | 0 | 3.92876E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs761630773 | -0.054 | 0.026 | N | 0.279 | 0.176 | 0.168933306366 | gnomAD-4.0.0 | 6.19749E-06 | None | None | None | None | I | None | 0 | 1.50055E-04 | None | 0 | 0 | None | 0 | 0 | 8.47629E-07 | 0 | 0 |
H/Y | rs1349108221 | None | 0.982 | N | 0.482 | 0.407 | 0.279776271856 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs1349108221 | None | 0.982 | N | 0.482 | 0.407 | 0.279776271856 | gnomAD-4.0.0 | 2.56291E-06 | None | None | None | None | I | None | 1.69165E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39329E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5219 | ambiguous | 0.4656 | ambiguous | 0.468 | Stabilizing | 0.919 | D | 0.452 | neutral | None | None | None | None | I |
H/C | 0.3036 | likely_benign | 0.2789 | benign | 0.658 | Stabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
H/D | 0.4781 | ambiguous | 0.4244 | ambiguous | -0.095 | Destabilizing | 0.984 | D | 0.455 | neutral | N | 0.386063316 | None | None | I |
H/E | 0.6706 | likely_pathogenic | 0.621 | pathogenic | -0.093 | Destabilizing | 0.919 | D | 0.463 | neutral | None | None | None | None | I |
H/F | 0.5519 | ambiguous | 0.5349 | ambiguous | 0.965 | Stabilizing | 0.996 | D | 0.488 | neutral | None | None | None | None | I |
H/G | 0.3784 | ambiguous | 0.3277 | benign | 0.244 | Stabilizing | 0.959 | D | 0.461 | neutral | None | None | None | None | I |
H/I | 0.7666 | likely_pathogenic | 0.7377 | pathogenic | 1.015 | Stabilizing | 0.988 | D | 0.602 | neutral | None | None | None | None | I |
H/K | 0.4185 | ambiguous | 0.3778 | ambiguous | 0.402 | Stabilizing | 0.851 | D | 0.455 | neutral | None | None | None | None | I |
H/L | 0.3188 | likely_benign | 0.2866 | benign | 1.015 | Stabilizing | 0.968 | D | 0.521 | neutral | N | 0.466805973 | None | None | I |
H/M | 0.7328 | likely_pathogenic | 0.693 | pathogenic | 0.704 | Stabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | I |
H/N | 0.1348 | likely_benign | 0.1165 | benign | 0.322 | Stabilizing | 0.896 | D | 0.498 | neutral | N | 0.395413518 | None | None | I |
H/P | 0.524 | ambiguous | 0.5127 | ambiguous | 0.856 | Stabilizing | 0.995 | D | 0.555 | neutral | N | 0.492790923 | None | None | I |
H/Q | 0.3722 | ambiguous | 0.3066 | benign | 0.373 | Stabilizing | 0.968 | D | 0.511 | neutral | N | 0.477533469 | None | None | I |
H/R | 0.1804 | likely_benign | 0.1583 | benign | -0.071 | Destabilizing | 0.026 | N | 0.279 | neutral | N | 0.400054121 | None | None | I |
H/S | 0.3677 | ambiguous | 0.3238 | benign | 0.434 | Stabilizing | 0.919 | D | 0.479 | neutral | None | None | None | None | I |
H/T | 0.54 | ambiguous | 0.4856 | ambiguous | 0.529 | Stabilizing | 0.988 | D | 0.467 | neutral | None | None | None | None | I |
H/V | 0.6456 | likely_pathogenic | 0.6024 | pathogenic | 0.856 | Stabilizing | 0.988 | D | 0.589 | neutral | None | None | None | None | I |
H/W | 0.6358 | likely_pathogenic | 0.5993 | pathogenic | 0.86 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
H/Y | 0.1846 | likely_benign | 0.1763 | benign | 1.146 | Stabilizing | 0.982 | D | 0.482 | neutral | N | 0.512166118 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.