Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31386 | 94381;94382;94383 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
N2AB | 29745 | 89458;89459;89460 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
N2A | 28818 | 86677;86678;86679 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
N2B | 22321 | 67186;67187;67188 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
Novex-1 | 22446 | 67561;67562;67563 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
Novex-2 | 22513 | 67762;67763;67764 | chr2:178547470;178547469;178547468 | chr2:179412197;179412196;179412195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs772833696 | -0.741 | 0.999 | N | 0.707 | 0.369 | 0.403328974453 | gnomAD-2.1.1 | 8.15E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.81E-05 | 0 |
E/A | rs772833696 | -0.741 | 0.999 | N | 0.707 | 0.369 | 0.403328974453 | gnomAD-4.0.0 | 6.16433E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.10104E-06 | 0 | 0 |
E/G | None | None | 1.0 | D | 0.773 | 0.49 | 0.598035270499 | gnomAD-4.0.0 | 1.36985E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80023E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8139 | likely_pathogenic | 0.7677 | pathogenic | -0.562 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.511918189 | None | None | I |
E/C | 0.9878 | likely_pathogenic | 0.9804 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
E/D | 0.9798 | likely_pathogenic | 0.9675 | pathogenic | -1.255 | Destabilizing | 0.999 | D | 0.487 | neutral | N | 0.504121028 | None | None | I |
E/F | 0.9965 | likely_pathogenic | 0.9944 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | I |
E/G | 0.9082 | likely_pathogenic | 0.8874 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.522225283 | None | None | I |
E/H | 0.9877 | likely_pathogenic | 0.9795 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/I | 0.9477 | likely_pathogenic | 0.9084 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | I |
E/K | 0.8296 | likely_pathogenic | 0.7851 | pathogenic | -0.49 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.472823589 | None | None | I |
E/L | 0.9828 | likely_pathogenic | 0.9695 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
E/M | 0.9513 | likely_pathogenic | 0.9255 | pathogenic | 0.471 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
E/N | 0.9856 | likely_pathogenic | 0.9778 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/P | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
E/Q | 0.5256 | ambiguous | 0.4479 | ambiguous | -0.576 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.473873545 | None | None | I |
E/R | 0.8906 | likely_pathogenic | 0.8619 | pathogenic | -0.605 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
E/S | 0.9159 | likely_pathogenic | 0.8768 | pathogenic | -1.049 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
E/T | 0.9263 | likely_pathogenic | 0.8884 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
E/V | 0.8514 | likely_pathogenic | 0.7565 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.478741404 | None | None | I |
E/W | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
E/Y | 0.9952 | likely_pathogenic | 0.9927 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.