Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31391 | 94396;94397;94398 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
N2AB | 29750 | 89473;89474;89475 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
N2A | 28823 | 86692;86693;86694 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
N2B | 22326 | 67201;67202;67203 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
Novex-1 | 22451 | 67576;67577;67578 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
Novex-2 | 22518 | 67777;67778;67779 | chr2:178547455;178547454;178547453 | chr2:179412182;179412181;179412180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.039 | N | 0.27 | 0.12 | 0.320256813643 | gnomAD-4.0.0 | 6.85386E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00584E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5833 | likely_pathogenic | 0.4637 | ambiguous | -1.168 | Destabilizing | 0.928 | D | 0.614 | neutral | N | 0.506955086 | None | None | I |
V/C | 0.889 | likely_pathogenic | 0.8287 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
V/D | 0.8864 | likely_pathogenic | 0.8296 | pathogenic | -1.012 | Destabilizing | 0.996 | D | 0.806 | deleterious | N | 0.515747928 | None | None | I |
V/E | 0.7616 | likely_pathogenic | 0.6687 | pathogenic | -1.081 | Destabilizing | 0.997 | D | 0.784 | deleterious | None | None | None | None | I |
V/F | 0.4172 | ambiguous | 0.3561 | ambiguous | -1.251 | Destabilizing | 0.978 | D | 0.769 | deleterious | N | 0.470456959 | None | None | I |
V/G | 0.6602 | likely_pathogenic | 0.5404 | ambiguous | -1.373 | Destabilizing | 0.989 | D | 0.774 | deleterious | N | 0.478152733 | None | None | I |
V/H | 0.9124 | likely_pathogenic | 0.8484 | pathogenic | -0.783 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
V/I | 0.0732 | likely_benign | 0.0725 | benign | -0.738 | Destabilizing | 0.039 | N | 0.27 | neutral | N | 0.448408215 | None | None | I |
V/K | 0.7239 | likely_pathogenic | 0.6346 | pathogenic | -0.753 | Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | I |
V/L | 0.452 | ambiguous | 0.3648 | ambiguous | -0.738 | Destabilizing | 0.476 | N | 0.559 | neutral | N | 0.453544676 | None | None | I |
V/M | 0.3125 | likely_benign | 0.2452 | benign | -0.585 | Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | I |
V/N | 0.7273 | likely_pathogenic | 0.6254 | pathogenic | -0.572 | Destabilizing | 0.997 | D | 0.811 | deleterious | None | None | None | None | I |
V/P | 0.8842 | likely_pathogenic | 0.8225 | pathogenic | -0.847 | Destabilizing | 0.997 | D | 0.814 | deleterious | None | None | None | None | I |
V/Q | 0.715 | likely_pathogenic | 0.6007 | pathogenic | -0.885 | Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | I |
V/R | 0.6859 | likely_pathogenic | 0.5947 | pathogenic | -0.182 | Destabilizing | 0.997 | D | 0.808 | deleterious | None | None | None | None | I |
V/S | 0.6784 | likely_pathogenic | 0.5428 | ambiguous | -1.066 | Destabilizing | 0.992 | D | 0.783 | deleterious | None | None | None | None | I |
V/T | 0.4864 | ambiguous | 0.4061 | ambiguous | -1.033 | Destabilizing | 0.944 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/W | 0.9604 | likely_pathogenic | 0.9387 | pathogenic | -1.275 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
V/Y | 0.8449 | likely_pathogenic | 0.7728 | pathogenic | -0.967 | Destabilizing | 0.992 | D | 0.781 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.