Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31399 | 94420;94421;94422 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
N2AB | 29758 | 89497;89498;89499 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
N2A | 28831 | 86716;86717;86718 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
N2B | 22334 | 67225;67226;67227 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
Novex-1 | 22459 | 67600;67601;67602 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
Novex-2 | 22526 | 67801;67802;67803 | chr2:178547431;178547430;178547429 | chr2:179412158;179412157;179412156 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2154146664 | None | 0.666 | N | 0.716 | 0.473 | 0.607483585054 | gnomAD-4.0.0 | 1.6198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.80978E-05 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.134 | N | 0.311 | 0.167 | 0.162503812791 | gnomAD-4.0.0 | 8.40268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18797E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.055 | likely_benign | 0.0569 | benign | -0.437 | Destabilizing | 0.022 | N | 0.272 | neutral | N | 0.468162326 | None | None | N |
P/C | 0.2697 | likely_benign | 0.3285 | benign | -0.744 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
P/D | 0.3875 | ambiguous | 0.4662 | ambiguous | -0.142 | Destabilizing | 0.949 | D | 0.599 | neutral | None | None | None | None | N |
P/E | 0.267 | likely_benign | 0.3391 | benign | -0.251 | Destabilizing | 0.841 | D | 0.571 | neutral | None | None | None | None | N |
P/F | 0.3741 | ambiguous | 0.4752 | ambiguous | -0.634 | Destabilizing | 0.974 | D | 0.808 | deleterious | None | None | None | None | N |
P/G | 0.2107 | likely_benign | 0.2413 | benign | -0.56 | Destabilizing | 0.725 | D | 0.631 | neutral | None | None | None | None | N |
P/H | 0.1645 | likely_benign | 0.195 | benign | -0.073 | Destabilizing | 0.998 | D | 0.733 | deleterious | None | None | None | None | N |
P/I | 0.2122 | likely_benign | 0.2621 | benign | -0.264 | Destabilizing | 0.949 | D | 0.767 | deleterious | None | None | None | None | N |
P/K | 0.2401 | likely_benign | 0.2985 | benign | -0.378 | Destabilizing | 0.841 | D | 0.577 | neutral | None | None | None | None | N |
P/L | 0.1094 | likely_benign | 0.1213 | benign | -0.264 | Destabilizing | 0.666 | D | 0.716 | prob.delet. | N | 0.497369397 | None | None | N |
P/M | 0.2363 | likely_benign | 0.269 | benign | -0.391 | Destabilizing | 0.998 | D | 0.734 | deleterious | None | None | None | None | N |
P/N | 0.2133 | likely_benign | 0.2551 | benign | -0.192 | Destabilizing | 0.949 | D | 0.661 | prob.neutral | None | None | None | None | N |
P/Q | 0.1348 | likely_benign | 0.1628 | benign | -0.417 | Destabilizing | 0.966 | D | 0.655 | prob.neutral | N | 0.480697174 | None | None | N |
P/R | 0.1682 | likely_benign | 0.2015 | benign | 0.121 | Stabilizing | 0.966 | D | 0.709 | prob.delet. | N | 0.494948581 | None | None | N |
P/S | 0.084 | likely_benign | 0.0957 | benign | -0.58 | Destabilizing | 0.134 | N | 0.311 | neutral | N | 0.512936909 | None | None | N |
P/T | 0.0756 | likely_benign | 0.0816 | benign | -0.584 | Destabilizing | 0.051 | N | 0.31 | neutral | N | 0.487982536 | None | None | N |
P/V | 0.1331 | likely_benign | 0.1502 | benign | -0.287 | Destabilizing | 0.725 | D | 0.635 | neutral | None | None | None | None | N |
P/W | 0.585 | likely_pathogenic | 0.6789 | pathogenic | -0.694 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
P/Y | 0.371 | ambiguous | 0.4699 | ambiguous | -0.397 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.