Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31402 | 94429;94430;94431 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
N2AB | 29761 | 89506;89507;89508 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
N2A | 28834 | 86725;86726;86727 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
N2B | 22337 | 67234;67235;67236 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
Novex-1 | 22462 | 67609;67610;67611 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
Novex-2 | 22529 | 67810;67811;67812 | chr2:178547422;178547421;178547420 | chr2:179412149;179412148;179412147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs794729537 | None | 0.682 | N | 0.585 | 0.313 | 0.243398259712 | gnomAD-4.0.0 | 6.90779E-07 | None | None | None | None | N | None | 0 | 2.29896E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs794729537 | None | 0.682 | N | 0.608 | 0.277 | 0.267299060538 | gnomAD-4.0.0 | 6.90779E-07 | None | None | None | None | N | None | 3.02425E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6587 | likely_pathogenic | 0.611 | pathogenic | -1.384 | Destabilizing | 0.987 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/D | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -2.569 | Highly Destabilizing | 0.979 | D | 0.725 | deleterious | N | 0.512728628 | None | None | N |
A/E | 0.9936 | likely_pathogenic | 0.9934 | pathogenic | -2.347 | Highly Destabilizing | 0.953 | D | 0.635 | neutral | None | None | None | None | N |
A/F | 0.9525 | likely_pathogenic | 0.9652 | pathogenic | -0.753 | Destabilizing | 0.909 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/G | 0.7155 | likely_pathogenic | 0.68 | pathogenic | -1.779 | Destabilizing | 0.813 | D | 0.597 | neutral | N | 0.489090965 | None | None | N |
A/H | 0.9963 | likely_pathogenic | 0.9965 | pathogenic | -2.109 | Highly Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/I | 0.4658 | ambiguous | 0.502 | ambiguous | -0.037 | Destabilizing | 0.037 | N | 0.461 | neutral | None | None | None | None | N |
A/K | 0.997 | likely_pathogenic | 0.9976 | pathogenic | -1.224 | Destabilizing | 0.953 | D | 0.642 | neutral | None | None | None | None | N |
A/L | 0.5068 | ambiguous | 0.5863 | pathogenic | -0.037 | Destabilizing | 0.37 | N | 0.549 | neutral | None | None | None | None | N |
A/M | 0.7296 | likely_pathogenic | 0.7535 | pathogenic | -0.49 | Destabilizing | 0.909 | D | 0.636 | neutral | None | None | None | None | N |
A/N | 0.9893 | likely_pathogenic | 0.9864 | pathogenic | -1.62 | Destabilizing | 0.984 | D | 0.71 | prob.delet. | None | None | None | None | N |
A/P | 0.8469 | likely_pathogenic | 0.8005 | pathogenic | -0.422 | Destabilizing | 0.979 | D | 0.678 | prob.neutral | N | 0.469834621 | None | None | N |
A/Q | 0.9852 | likely_pathogenic | 0.9858 | pathogenic | -1.379 | Destabilizing | 0.984 | D | 0.634 | neutral | None | None | None | None | N |
A/R | 0.9881 | likely_pathogenic | 0.9905 | pathogenic | -1.379 | Destabilizing | 0.953 | D | 0.632 | neutral | None | None | None | None | N |
A/S | 0.4954 | ambiguous | 0.4454 | ambiguous | -1.999 | Destabilizing | 0.682 | D | 0.585 | neutral | N | 0.493103436 | None | None | N |
A/T | 0.519 | ambiguous | 0.4509 | ambiguous | -1.655 | Destabilizing | 0.682 | D | 0.608 | neutral | N | 0.466098411 | None | None | N |
A/V | 0.2587 | likely_benign | 0.2455 | benign | -0.422 | Destabilizing | 0.007 | N | 0.362 | neutral | N | 0.508181663 | None | None | N |
A/W | 0.9968 | likely_pathogenic | 0.9976 | pathogenic | -1.492 | Destabilizing | 0.996 | D | 0.727 | deleterious | None | None | None | None | N |
A/Y | 0.9911 | likely_pathogenic | 0.9934 | pathogenic | -0.991 | Destabilizing | 0.953 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.