Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31403 | 94432;94433;94434 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
N2AB | 29762 | 89509;89510;89511 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
N2A | 28835 | 86728;86729;86730 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
N2B | 22338 | 67237;67238;67239 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
Novex-1 | 22463 | 67612;67613;67614 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
Novex-2 | 22530 | 67813;67814;67815 | chr2:178547419;178547418;178547417 | chr2:179412146;179412145;179412144 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs746139438 | -0.821 | 0.603 | N | 0.229 | 0.279 | 0.207176502487 | gnomAD-2.1.1 | 8.47E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.88E-05 | 0 |
E/K | rs746139438 | -0.821 | 0.603 | N | 0.229 | 0.279 | 0.207176502487 | gnomAD-4.0.0 | 2.76615E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.62935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.23 | likely_benign | 0.2904 | benign | -0.925 | Destabilizing | 0.991 | D | 0.454 | neutral | N | 0.461833298 | None | None | N |
E/C | 0.895 | likely_pathogenic | 0.9256 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/D | 0.4162 | ambiguous | 0.5109 | ambiguous | -1.217 | Destabilizing | 0.996 | D | 0.385 | neutral | N | 0.451925736 | None | None | N |
E/F | 0.9167 | likely_pathogenic | 0.9495 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/G | 0.3635 | ambiguous | 0.4447 | ambiguous | -1.331 | Destabilizing | 0.999 | D | 0.541 | neutral | N | 0.46270009 | None | None | N |
E/H | 0.6856 | likely_pathogenic | 0.782 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
E/I | 0.5828 | likely_pathogenic | 0.6799 | pathogenic | 0.204 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.1979 | likely_benign | 0.2876 | benign | -1.176 | Destabilizing | 0.603 | D | 0.229 | neutral | N | 0.338677588 | None | None | N |
E/L | 0.6358 | likely_pathogenic | 0.7379 | pathogenic | 0.204 | Stabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/M | 0.6017 | likely_pathogenic | 0.6987 | pathogenic | 0.719 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.5144 | ambiguous | 0.6385 | pathogenic | -1.57 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
E/P | 0.9793 | likely_pathogenic | 0.9858 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Q | 0.1319 | likely_benign | 0.1667 | benign | -1.356 | Destabilizing | 0.991 | D | 0.567 | neutral | N | 0.409057606 | None | None | N |
E/R | 0.3376 | likely_benign | 0.4392 | ambiguous | -0.862 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | N |
E/S | 0.2925 | likely_benign | 0.3738 | ambiguous | -1.953 | Destabilizing | 0.993 | D | 0.517 | neutral | None | None | None | None | N |
E/T | 0.3655 | ambiguous | 0.4573 | ambiguous | -1.618 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/V | 0.3548 | ambiguous | 0.4448 | ambiguous | -0.152 | Destabilizing | 0.999 | D | 0.688 | prob.delet. | N | 0.46165994 | None | None | N |
E/W | 0.9775 | likely_pathogenic | 0.9849 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/Y | 0.8621 | likely_pathogenic | 0.9096 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.