Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31420 | 94483;94484;94485 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
N2AB | 29779 | 89560;89561;89562 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
N2A | 28852 | 86779;86780;86781 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
N2B | 22355 | 67288;67289;67290 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
Novex-1 | 22480 | 67663;67664;67665 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
Novex-2 | 22547 | 67864;67865;67866 | chr2:178547267;178547266;178547265 | chr2:179411994;179411993;179411992 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1697609809 | None | 0.83 | N | 0.7 | 0.315 | 0.627153701111 | gnomAD-4.0.0 | 6.84396E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99719E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3028 | likely_benign | 0.3259 | benign | -1.548 | Destabilizing | 0.581 | D | 0.482 | neutral | N | 0.514654637 | None | None | N |
V/C | 0.6948 | likely_pathogenic | 0.7129 | pathogenic | -1.274 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.8579 | likely_pathogenic | 0.8966 | pathogenic | -2.062 | Highly Destabilizing | 0.929 | D | 0.844 | deleterious | None | None | None | None | N |
V/E | 0.7259 | likely_pathogenic | 0.7811 | pathogenic | -2.066 | Highly Destabilizing | 0.908 | D | 0.816 | deleterious | N | 0.513683815 | None | None | N |
V/F | 0.349 | ambiguous | 0.3949 | ambiguous | -1.45 | Destabilizing | 0.866 | D | 0.812 | deleterious | None | None | None | None | N |
V/G | 0.4978 | ambiguous | 0.5489 | ambiguous | -1.864 | Destabilizing | 0.908 | D | 0.827 | deleterious | N | 0.503848447 | None | None | N |
V/H | 0.8322 | likely_pathogenic | 0.8719 | pathogenic | -1.574 | Destabilizing | 0.993 | D | 0.834 | deleterious | None | None | None | None | N |
V/I | 0.0749 | likely_benign | 0.0765 | benign | -0.768 | Destabilizing | 0.006 | N | 0.26 | neutral | None | None | None | None | N |
V/K | 0.7171 | likely_pathogenic | 0.7671 | pathogenic | -1.277 | Destabilizing | 0.929 | D | 0.813 | deleterious | None | None | None | None | N |
V/L | 0.3764 | ambiguous | 0.3702 | ambiguous | -0.768 | Destabilizing | 0.09 | N | 0.385 | neutral | N | 0.479334956 | None | None | N |
V/M | 0.2496 | likely_benign | 0.2739 | benign | -0.556 | Destabilizing | 0.83 | D | 0.7 | prob.neutral | N | 0.496758103 | None | None | N |
V/N | 0.6404 | likely_pathogenic | 0.6926 | pathogenic | -1.172 | Destabilizing | 0.976 | D | 0.842 | deleterious | None | None | None | None | N |
V/P | 0.8382 | likely_pathogenic | 0.8421 | pathogenic | -0.995 | Destabilizing | 0.976 | D | 0.826 | deleterious | None | None | None | None | N |
V/Q | 0.6173 | likely_pathogenic | 0.6646 | pathogenic | -1.383 | Destabilizing | 0.976 | D | 0.82 | deleterious | None | None | None | None | N |
V/R | 0.6322 | likely_pathogenic | 0.6939 | pathogenic | -0.786 | Destabilizing | 0.929 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.4077 | ambiguous | 0.4551 | ambiguous | -1.62 | Destabilizing | 0.929 | D | 0.811 | deleterious | None | None | None | None | N |
V/T | 0.2892 | likely_benign | 0.3084 | benign | -1.516 | Destabilizing | 0.648 | D | 0.59 | neutral | None | None | None | None | N |
V/W | 0.9378 | likely_pathogenic | 0.952 | pathogenic | -1.704 | Destabilizing | 0.993 | D | 0.828 | deleterious | None | None | None | None | N |
V/Y | 0.7651 | likely_pathogenic | 0.8085 | pathogenic | -1.37 | Destabilizing | 0.929 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.