Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31423 | 94492;94493;94494 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
N2AB | 29782 | 89569;89570;89571 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
N2A | 28855 | 86788;86789;86790 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
N2B | 22358 | 67297;67298;67299 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
Novex-1 | 22483 | 67672;67673;67674 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
Novex-2 | 22550 | 67873;67874;67875 | chr2:178547258;178547257;178547256 | chr2:179411985;179411984;179411983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs751814511 | -0.823 | 0.859 | N | 0.491 | 0.282 | 0.247872288689 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
N/H | rs751814511 | -0.823 | 0.859 | N | 0.491 | 0.282 | 0.247872288689 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77346E-05 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs1387191410 | 0.406 | 0.22 | N | 0.455 | 0.133 | 0.16115917748 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
N/K | rs1387191410 | 0.406 | 0.22 | N | 0.455 | 0.133 | 0.16115917748 | gnomAD-4.0.0 | 1.59148E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1682 | likely_benign | 0.19 | benign | -0.642 | Destabilizing | 0.072 | N | 0.439 | neutral | None | None | None | None | I |
N/C | 0.2734 | likely_benign | 0.2965 | benign | 0.149 | Stabilizing | 0.909 | D | 0.541 | neutral | None | None | None | None | I |
N/D | 0.1137 | likely_benign | 0.1311 | benign | -0.751 | Destabilizing | 0.22 | N | 0.5 | neutral | N | 0.399366261 | None | None | I |
N/E | 0.3355 | likely_benign | 0.3942 | ambiguous | -0.777 | Destabilizing | 0.272 | N | 0.451 | neutral | None | None | None | None | I |
N/F | 0.4227 | ambiguous | 0.5013 | ambiguous | -1.085 | Destabilizing | 0.726 | D | 0.555 | neutral | None | None | None | None | I |
N/G | 0.1861 | likely_benign | 0.1984 | benign | -0.807 | Destabilizing | 0.072 | N | 0.441 | neutral | None | None | None | None | I |
N/H | 0.116 | likely_benign | 0.132 | benign | -0.933 | Destabilizing | 0.859 | D | 0.491 | neutral | N | 0.501474696 | None | None | I |
N/I | 0.3238 | likely_benign | 0.3779 | ambiguous | -0.281 | Destabilizing | 0.331 | N | 0.544 | neutral | N | 0.500655215 | None | None | I |
N/K | 0.3702 | ambiguous | 0.4609 | ambiguous | 0.008 | Stabilizing | 0.22 | N | 0.455 | neutral | N | 0.516846793 | None | None | I |
N/L | 0.2327 | likely_benign | 0.2499 | benign | -0.281 | Destabilizing | 0.157 | N | 0.493 | neutral | None | None | None | None | I |
N/M | 0.2869 | likely_benign | 0.3164 | benign | 0.456 | Stabilizing | 0.909 | D | 0.526 | neutral | None | None | None | None | I |
N/P | 0.8092 | likely_pathogenic | 0.795 | pathogenic | -0.378 | Destabilizing | 0.726 | D | 0.527 | neutral | None | None | None | None | I |
N/Q | 0.307 | likely_benign | 0.3504 | ambiguous | -0.77 | Destabilizing | 0.726 | D | 0.476 | neutral | None | None | None | None | I |
N/R | 0.403 | ambiguous | 0.4829 | ambiguous | 0.209 | Stabilizing | 0.567 | D | 0.457 | neutral | None | None | None | None | I |
N/S | 0.0625 | likely_benign | 0.0638 | benign | -0.346 | Destabilizing | 0.002 | N | 0.079 | neutral | N | 0.454083394 | None | None | I |
N/T | 0.0928 | likely_benign | 0.0921 | benign | -0.24 | Destabilizing | None | N | 0.081 | neutral | N | 0.467393834 | None | None | I |
N/V | 0.2518 | likely_benign | 0.277 | benign | -0.378 | Destabilizing | 0.157 | N | 0.481 | neutral | None | None | None | None | I |
N/W | 0.739 | likely_pathogenic | 0.7899 | pathogenic | -0.972 | Destabilizing | 0.968 | D | 0.673 | neutral | None | None | None | None | I |
N/Y | 0.1819 | likely_benign | 0.2227 | benign | -0.699 | Destabilizing | 0.667 | D | 0.541 | neutral | N | 0.48255096 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.