Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31438 | 94537;94538;94539 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
N2AB | 29797 | 89614;89615;89616 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
N2A | 28870 | 86833;86834;86835 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
N2B | 22373 | 67342;67343;67344 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
Novex-1 | 22498 | 67717;67718;67719 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
Novex-2 | 22565 | 67918;67919;67920 | chr2:178547213;178547212;178547211 | chr2:179411940;179411939;179411938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs769930510 | -0.418 | 0.999 | N | 0.73 | 0.367 | 0.297718772494 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/N | rs769930510 | -0.418 | 0.999 | N | 0.73 | 0.367 | 0.297718772494 | gnomAD-4.0.0 | 2.05264E-06 | None | None | None | None | I | None | 0 | 4.47227E-05 | None | 0 | 0 | None | 0 | 0 | 8.99493E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2557 | likely_benign | 0.2413 | benign | -0.579 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
S/C | 0.2245 | likely_benign | 0.1783 | benign | -0.358 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.484717007 | None | None | I |
S/D | 0.9159 | likely_pathogenic | 0.9298 | pathogenic | -0.416 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
S/E | 0.9424 | likely_pathogenic | 0.9511 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
S/F | 0.8499 | likely_pathogenic | 0.838 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
S/G | 0.3784 | ambiguous | 0.3383 | benign | -0.754 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.476414305 | None | None | I |
S/H | 0.8385 | likely_pathogenic | 0.8145 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
S/I | 0.8965 | likely_pathogenic | 0.8819 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.512251784 | None | None | I |
S/K | 0.9869 | likely_pathogenic | 0.9851 | pathogenic | -0.712 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | I |
S/L | 0.5108 | ambiguous | 0.5114 | ambiguous | -0.235 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
S/M | 0.649 | likely_pathogenic | 0.6475 | pathogenic | 0.23 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
S/N | 0.5743 | likely_pathogenic | 0.4913 | ambiguous | -0.539 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | N | 0.500895478 | None | None | I |
S/P | 0.9936 | likely_pathogenic | 0.9942 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
S/Q | 0.8981 | likely_pathogenic | 0.8803 | pathogenic | -0.828 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
S/R | 0.9775 | likely_pathogenic | 0.9704 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.498867562 | None | None | I |
S/T | 0.355 | ambiguous | 0.361 | ambiguous | -0.58 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.473321022 | None | None | I |
S/V | 0.7902 | likely_pathogenic | 0.7717 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
S/W | 0.8881 | likely_pathogenic | 0.8844 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
S/Y | 0.7817 | likely_pathogenic | 0.771 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.