Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31439 | 94540;94541;94542 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
N2AB | 29798 | 89617;89618;89619 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
N2A | 28871 | 86836;86837;86838 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
N2B | 22374 | 67345;67346;67347 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
Novex-1 | 22499 | 67720;67721;67722 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
Novex-2 | 22566 | 67921;67922;67923 | chr2:178547210;178547209;178547208 | chr2:179411937;179411936;179411935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.956 | N | 0.561 | 0.29 | 0.253726318573 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2614 | likely_benign | 0.2812 | benign | 0.033 | Stabilizing | 0.983 | D | 0.624 | neutral | None | None | None | None | I |
K/C | 0.6032 | likely_pathogenic | 0.6452 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
K/D | 0.4388 | ambiguous | 0.4869 | ambiguous | -0.102 | Destabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | I |
K/E | 0.1491 | likely_benign | 0.1723 | benign | -0.106 | Destabilizing | 0.956 | D | 0.561 | neutral | N | 0.43293733 | None | None | I |
K/F | 0.8233 | likely_pathogenic | 0.8582 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/G | 0.3952 | ambiguous | 0.4199 | ambiguous | -0.126 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
K/H | 0.282 | likely_benign | 0.3014 | benign | -0.295 | Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | I |
K/I | 0.4377 | ambiguous | 0.5052 | ambiguous | 0.37 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.512555694 | None | None | I |
K/L | 0.3871 | ambiguous | 0.4209 | ambiguous | 0.37 | Stabilizing | 0.995 | D | 0.563 | neutral | None | None | None | None | I |
K/M | 0.3007 | likely_benign | 0.3304 | benign | 0.079 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/N | 0.3357 | likely_benign | 0.3852 | ambiguous | 0.197 | Stabilizing | 0.997 | D | 0.609 | neutral | N | 0.493449858 | None | None | I |
K/P | 0.2596 | likely_benign | 0.2749 | benign | 0.283 | Stabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
K/Q | 0.1179 | likely_benign | 0.1221 | benign | 0.042 | Stabilizing | 0.63 | D | 0.284 | neutral | N | 0.493103142 | None | None | I |
K/R | 0.0755 | likely_benign | 0.0744 | benign | 0.008 | Stabilizing | 0.978 | D | 0.533 | neutral | N | 0.446389417 | None | None | I |
K/S | 0.3262 | likely_benign | 0.3568 | ambiguous | -0.22 | Destabilizing | 0.983 | D | 0.599 | neutral | None | None | None | None | I |
K/T | 0.1791 | likely_benign | 0.2029 | benign | -0.091 | Destabilizing | 0.997 | D | 0.577 | neutral | N | 0.472997228 | None | None | I |
K/V | 0.3342 | likely_benign | 0.3739 | ambiguous | 0.283 | Stabilizing | 0.998 | D | 0.614 | neutral | None | None | None | None | I |
K/W | 0.8003 | likely_pathogenic | 0.8236 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/Y | 0.6801 | likely_pathogenic | 0.7273 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.