Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31447 | 94564;94565;94566 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
N2AB | 29806 | 89641;89642;89643 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
N2A | 28879 | 86860;86861;86862 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
N2B | 22382 | 67369;67370;67371 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
Novex-1 | 22507 | 67744;67745;67746 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
Novex-2 | 22574 | 67945;67946;67947 | chr2:178547186;178547185;178547184 | chr2:179411913;179411912;179411911 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1169915824 | -2.251 | 0.993 | N | 0.799 | 0.368 | 0.346315397577 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1169915824 | -2.251 | 0.993 | N | 0.799 | 0.368 | 0.346315397577 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9432 | likely_pathogenic | 0.9211 | pathogenic | -1.472 | Destabilizing | 0.983 | D | 0.672 | neutral | None | None | None | None | N |
K/C | 0.8493 | likely_pathogenic | 0.8104 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
K/D | 0.9961 | likely_pathogenic | 0.9938 | pathogenic | -2.476 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
K/E | 0.8999 | likely_pathogenic | 0.8715 | pathogenic | -2.145 | Highly Destabilizing | 0.977 | D | 0.649 | neutral | N | 0.495082127 | None | None | N |
K/F | 0.9676 | likely_pathogenic | 0.9602 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
K/G | 0.9647 | likely_pathogenic | 0.9524 | pathogenic | -1.954 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
K/H | 0.6799 | likely_pathogenic | 0.6401 | pathogenic | -1.802 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
K/I | 0.9029 | likely_pathogenic | 0.8836 | pathogenic | -0.077 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
K/L | 0.8564 | likely_pathogenic | 0.8331 | pathogenic | -0.077 | Destabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
K/M | 0.6349 | likely_pathogenic | 0.6066 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.502165342 | None | None | N |
K/N | 0.9735 | likely_pathogenic | 0.9636 | pathogenic | -2.192 | Highly Destabilizing | 0.993 | D | 0.799 | deleterious | N | 0.513021798 | None | None | N |
K/P | 0.9994 | likely_pathogenic | 0.9989 | pathogenic | -0.526 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
K/Q | 0.4513 | ambiguous | 0.4045 | ambiguous | -1.711 | Destabilizing | 0.993 | D | 0.799 | deleterious | N | 0.472204932 | None | None | N |
K/R | 0.096 | likely_benign | 0.0952 | benign | -1.218 | Destabilizing | 0.235 | N | 0.377 | neutral | N | 0.445349267 | None | None | N |
K/S | 0.9571 | likely_pathogenic | 0.9429 | pathogenic | -2.567 | Highly Destabilizing | 0.983 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/T | 0.8639 | likely_pathogenic | 0.827 | pathogenic | -1.984 | Destabilizing | 0.997 | D | 0.787 | deleterious | N | 0.500398045 | None | None | N |
K/V | 0.8438 | likely_pathogenic | 0.8175 | pathogenic | -0.526 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
K/W | 0.9432 | likely_pathogenic | 0.9287 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/Y | 0.8887 | likely_pathogenic | 0.8703 | pathogenic | -0.482 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.