Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3146194606;94607;94608 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
N2AB2982089683;89684;89685 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
N2A2889386902;86903;86904 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
N2B2239667411;67412;67413 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
Novex-12252167786;67787;67788 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
Novex-22258867987;67988;67989 chr2:178547144;178547143;178547142chr2:179411871;179411870;179411869
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTG
  • RefSeq wild type template codon: CAC
  • Domain: Fn3-117
  • Domain position: 54
  • Structural Position: 72
  • Q(SASA): 0.3358
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/L rs1206905148 None 0.001 N 0.093 0.098 0.213573922156 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
V/L rs1206905148 None 0.001 N 0.093 0.098 0.213573922156 gnomAD-4.0.0 6.57307E-06 None None None None I None 0 0 None 0 0 None 0 0 1.47037E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.134 likely_benign 0.1102 benign -0.616 Destabilizing 0.001 N 0.113 neutral N 0.437287144 None None I
V/C 0.5456 ambiguous 0.4943 ambiguous -0.593 Destabilizing 0.944 D 0.264 neutral None None None None I
V/D 0.3017 likely_benign 0.2705 benign -0.436 Destabilizing 0.69 D 0.425 neutral None None None None I
V/E 0.2586 likely_benign 0.2472 benign -0.507 Destabilizing 0.627 D 0.396 neutral N 0.448522858 None None I
V/F 0.1197 likely_benign 0.1171 benign -0.704 Destabilizing 0.69 D 0.335 neutral None None None None I
V/G 0.1668 likely_benign 0.1347 benign -0.776 Destabilizing 0.193 N 0.406 neutral N 0.456315622 None None I
V/H 0.4156 ambiguous 0.3731 ambiguous -0.184 Destabilizing 0.981 D 0.365 neutral None None None None I
V/I 0.0628 likely_benign 0.0661 benign -0.32 Destabilizing 0.004 N 0.139 neutral None None None None I
V/K 0.3517 ambiguous 0.3474 ambiguous -0.494 Destabilizing 0.69 D 0.4 neutral None None None None I
V/L 0.1116 likely_benign 0.1023 benign -0.32 Destabilizing 0.001 N 0.093 neutral N 0.438423295 None None I
V/M 0.0866 likely_benign 0.085 benign -0.497 Destabilizing 0.627 D 0.345 neutral N 0.470458355 None None I
V/N 0.1466 likely_benign 0.122 benign -0.294 Destabilizing 0.69 D 0.41 neutral None None None None I
V/P 0.7317 likely_pathogenic 0.67 pathogenic -0.386 Destabilizing 0.818 D 0.386 neutral None None None None I
V/Q 0.2616 likely_benign 0.2322 benign -0.483 Destabilizing 0.818 D 0.352 neutral None None None None I
V/R 0.3483 ambiguous 0.3482 ambiguous 0.008 Stabilizing 0.69 D 0.411 neutral None None None None I
V/S 0.1193 likely_benign 0.0981 benign -0.654 Destabilizing 0.241 N 0.313 neutral None None None None I
V/T 0.1219 likely_benign 0.1088 benign -0.622 Destabilizing 0.008 N 0.175 neutral None None None None I
V/W 0.6549 likely_pathogenic 0.6302 pathogenic -0.799 Destabilizing 0.981 D 0.401 neutral None None None None I
V/Y 0.3321 likely_benign 0.3022 benign -0.508 Destabilizing 0.932 D 0.307 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.