Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31461 | 94606;94607;94608 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
N2AB | 29820 | 89683;89684;89685 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
N2A | 28893 | 86902;86903;86904 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
N2B | 22396 | 67411;67412;67413 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
Novex-1 | 22521 | 67786;67787;67788 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
Novex-2 | 22588 | 67987;67988;67989 | chr2:178547144;178547143;178547142 | chr2:179411871;179411870;179411869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1206905148 | None | 0.001 | N | 0.093 | 0.098 | 0.213573922156 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs1206905148 | None | 0.001 | N | 0.093 | 0.098 | 0.213573922156 | gnomAD-4.0.0 | 6.57307E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47037E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.134 | likely_benign | 0.1102 | benign | -0.616 | Destabilizing | 0.001 | N | 0.113 | neutral | N | 0.437287144 | None | None | I |
V/C | 0.5456 | ambiguous | 0.4943 | ambiguous | -0.593 | Destabilizing | 0.944 | D | 0.264 | neutral | None | None | None | None | I |
V/D | 0.3017 | likely_benign | 0.2705 | benign | -0.436 | Destabilizing | 0.69 | D | 0.425 | neutral | None | None | None | None | I |
V/E | 0.2586 | likely_benign | 0.2472 | benign | -0.507 | Destabilizing | 0.627 | D | 0.396 | neutral | N | 0.448522858 | None | None | I |
V/F | 0.1197 | likely_benign | 0.1171 | benign | -0.704 | Destabilizing | 0.69 | D | 0.335 | neutral | None | None | None | None | I |
V/G | 0.1668 | likely_benign | 0.1347 | benign | -0.776 | Destabilizing | 0.193 | N | 0.406 | neutral | N | 0.456315622 | None | None | I |
V/H | 0.4156 | ambiguous | 0.3731 | ambiguous | -0.184 | Destabilizing | 0.981 | D | 0.365 | neutral | None | None | None | None | I |
V/I | 0.0628 | likely_benign | 0.0661 | benign | -0.32 | Destabilizing | 0.004 | N | 0.139 | neutral | None | None | None | None | I |
V/K | 0.3517 | ambiguous | 0.3474 | ambiguous | -0.494 | Destabilizing | 0.69 | D | 0.4 | neutral | None | None | None | None | I |
V/L | 0.1116 | likely_benign | 0.1023 | benign | -0.32 | Destabilizing | 0.001 | N | 0.093 | neutral | N | 0.438423295 | None | None | I |
V/M | 0.0866 | likely_benign | 0.085 | benign | -0.497 | Destabilizing | 0.627 | D | 0.345 | neutral | N | 0.470458355 | None | None | I |
V/N | 0.1466 | likely_benign | 0.122 | benign | -0.294 | Destabilizing | 0.69 | D | 0.41 | neutral | None | None | None | None | I |
V/P | 0.7317 | likely_pathogenic | 0.67 | pathogenic | -0.386 | Destabilizing | 0.818 | D | 0.386 | neutral | None | None | None | None | I |
V/Q | 0.2616 | likely_benign | 0.2322 | benign | -0.483 | Destabilizing | 0.818 | D | 0.352 | neutral | None | None | None | None | I |
V/R | 0.3483 | ambiguous | 0.3482 | ambiguous | 0.008 | Stabilizing | 0.69 | D | 0.411 | neutral | None | None | None | None | I |
V/S | 0.1193 | likely_benign | 0.0981 | benign | -0.654 | Destabilizing | 0.241 | N | 0.313 | neutral | None | None | None | None | I |
V/T | 0.1219 | likely_benign | 0.1088 | benign | -0.622 | Destabilizing | 0.008 | N | 0.175 | neutral | None | None | None | None | I |
V/W | 0.6549 | likely_pathogenic | 0.6302 | pathogenic | -0.799 | Destabilizing | 0.981 | D | 0.401 | neutral | None | None | None | None | I |
V/Y | 0.3321 | likely_benign | 0.3022 | benign | -0.508 | Destabilizing | 0.932 | D | 0.307 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.