Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31463 | 94612;94613;94614 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
N2AB | 29822 | 89689;89690;89691 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
N2A | 28895 | 86908;86909;86910 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
N2B | 22398 | 67417;67418;67419 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
Novex-1 | 22523 | 67792;67793;67794 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
Novex-2 | 22590 | 67993;67994;67995 | chr2:178547138;178547137;178547136 | chr2:179411865;179411864;179411863 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 1.0 | N | 0.758 | 0.499 | 0.782932109435 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
C/Y | rs760317660 | -1.374 | 1.0 | N | 0.819 | 0.383 | 0.676867754606 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4483 | ambiguous | 0.4913 | ambiguous | -1.676 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | N |
C/D | 0.9264 | likely_pathogenic | 0.9513 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
C/E | 0.94 | likely_pathogenic | 0.9595 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
C/F | 0.3828 | ambiguous | 0.4513 | ambiguous | -1.02 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.503453421 | None | None | N |
C/G | 0.3745 | ambiguous | 0.4199 | ambiguous | -2.029 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.446559988 | None | None | N |
C/H | 0.7986 | likely_pathogenic | 0.8602 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
C/I | 0.3268 | likely_benign | 0.3496 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
C/K | 0.9354 | likely_pathogenic | 0.9597 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
C/L | 0.3943 | ambiguous | 0.4431 | ambiguous | -0.72 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
C/M | 0.6096 | likely_pathogenic | 0.6354 | pathogenic | 0.37 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
C/N | 0.742 | likely_pathogenic | 0.7958 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
C/P | 0.9695 | likely_pathogenic | 0.9698 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
C/Q | 0.8283 | likely_pathogenic | 0.8749 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
C/R | 0.7374 | likely_pathogenic | 0.8297 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.498276888 | None | None | N |
C/S | 0.3701 | ambiguous | 0.4357 | ambiguous | -1.806 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.470876856 | None | None | N |
C/T | 0.474 | ambiguous | 0.506 | ambiguous | -1.402 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
C/V | 0.2634 | likely_benign | 0.2752 | benign | -1.017 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
C/W | 0.8122 | likely_pathogenic | 0.8618 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.481546548 | None | None | N |
C/Y | 0.5852 | likely_pathogenic | 0.68 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.498796963 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.