Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31465 | 94618;94619;94620 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
N2AB | 29824 | 89695;89696;89697 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
N2A | 28897 | 86914;86915;86916 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
N2B | 22400 | 67423;67424;67425 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
Novex-1 | 22525 | 67798;67799;67800 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
Novex-2 | 22592 | 67999;68000;68001 | chr2:178547132;178547131;178547130 | chr2:179411859;179411858;179411857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs752194452 | 0.288 | 0.977 | N | 0.598 | 0.386 | 0.286848849266 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.34E-05 | 0 |
E/K | rs752194452 | 0.288 | 0.977 | N | 0.598 | 0.386 | 0.286848849266 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 0 |
E/K | rs752194452 | 0.288 | 0.977 | N | 0.598 | 0.386 | 0.286848849266 | gnomAD-4.0.0 | 5.57718E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.9333E-06 | 2.19563E-05 | 0 |
E/Q | None | None | 0.997 | N | 0.637 | 0.299 | 0.218112801441 | gnomAD-4.0.0 | 2.05261E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51902E-05 | None | 1.87259E-05 | 0 | 8.99476E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1424 | likely_benign | 0.1617 | benign | -0.389 | Destabilizing | 0.977 | D | 0.665 | neutral | N | 0.454680826 | None | None | I |
E/C | 0.7694 | likely_pathogenic | 0.7983 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/D | 0.0745 | likely_benign | 0.0772 | benign | -0.404 | Destabilizing | 0.117 | N | 0.223 | neutral | N | 0.438441937 | None | None | I |
E/F | 0.6851 | likely_pathogenic | 0.741 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/G | 0.1503 | likely_benign | 0.1809 | benign | -0.614 | Destabilizing | 0.993 | D | 0.641 | neutral | N | 0.467956768 | None | None | I |
E/H | 0.4011 | ambiguous | 0.4611 | ambiguous | 0.357 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/I | 0.4316 | ambiguous | 0.4799 | ambiguous | 0.183 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/K | 0.248 | likely_benign | 0.3245 | benign | 0.072 | Stabilizing | 0.977 | D | 0.598 | neutral | N | 0.471034359 | None | None | I |
E/L | 0.3966 | ambiguous | 0.447 | ambiguous | 0.183 | Stabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/M | 0.486 | ambiguous | 0.5308 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/N | 0.1803 | likely_benign | 0.2124 | benign | -0.333 | Destabilizing | 0.99 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/P | 0.7462 | likely_pathogenic | 0.7768 | pathogenic | 0.012 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/Q | 0.1485 | likely_benign | 0.172 | benign | -0.257 | Destabilizing | 0.997 | D | 0.637 | neutral | N | 0.481251352 | None | None | I |
E/R | 0.3468 | ambiguous | 0.4305 | ambiguous | 0.472 | Stabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/S | 0.1511 | likely_benign | 0.1791 | benign | -0.522 | Destabilizing | 0.983 | D | 0.634 | neutral | None | None | None | None | I |
E/T | 0.2033 | likely_benign | 0.2301 | benign | -0.331 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/V | 0.2545 | likely_benign | 0.2895 | benign | 0.012 | Stabilizing | 0.997 | D | 0.711 | prob.delet. | N | 0.486985246 | None | None | I |
E/W | 0.8838 | likely_pathogenic | 0.9122 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
E/Y | 0.5343 | ambiguous | 0.5949 | pathogenic | 0.199 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.