Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31466 | 94621;94622;94623 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
N2AB | 29825 | 89698;89699;89700 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
N2A | 28898 | 86917;86918;86919 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
N2B | 22401 | 67426;67427;67428 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
Novex-1 | 22526 | 67801;67802;67803 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
Novex-2 | 22593 | 68002;68003;68004 | chr2:178547129;178547128;178547127 | chr2:179411856;179411855;179411854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs1697549166 | None | 1.0 | N | 0.779 | 0.501 | 0.816487136085 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4054 | ambiguous | 0.3932 | ambiguous | -2.123 | Highly Destabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | I |
C/D | 0.7049 | likely_pathogenic | 0.7486 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
C/E | 0.7694 | likely_pathogenic | 0.7945 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
C/F | 0.4238 | ambiguous | 0.462 | ambiguous | -1.326 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.470956575 | None | None | I |
C/G | 0.1423 | likely_benign | 0.1439 | benign | -2.461 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.459689175 | None | None | I |
C/H | 0.5178 | ambiguous | 0.5746 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
C/I | 0.6913 | likely_pathogenic | 0.681 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
C/K | 0.5307 | ambiguous | 0.5787 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
C/L | 0.4085 | ambiguous | 0.4027 | ambiguous | -1.213 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | I |
C/M | 0.573 | likely_pathogenic | 0.5682 | pathogenic | 0.162 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
C/N | 0.3032 | likely_benign | 0.3283 | benign | -1.892 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
C/P | 0.6987 | likely_pathogenic | 0.6697 | pathogenic | -1.494 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
C/Q | 0.4727 | ambiguous | 0.4985 | ambiguous | -1.645 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
C/R | 0.2454 | likely_benign | 0.2934 | benign | -1.535 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.446055769 | None | None | I |
C/S | 0.3107 | likely_benign | 0.3285 | benign | -2.374 | Highly Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.495695156 | None | None | I |
C/T | 0.3179 | likely_benign | 0.291 | benign | -2.034 | Highly Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
C/V | 0.5339 | ambiguous | 0.5063 | ambiguous | -1.494 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
C/W | 0.6604 | likely_pathogenic | 0.706 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.483326839 | None | None | I |
C/Y | 0.3905 | ambiguous | 0.4544 | ambiguous | -1.449 | Destabilizing | 1.0 | D | 0.812 | deleterious | N | 0.48256637 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.