Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31468 | 94627;94628;94629 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
N2AB | 29827 | 89704;89705;89706 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
N2A | 28900 | 86923;86924;86925 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
N2B | 22403 | 67432;67433;67434 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
Novex-1 | 22528 | 67807;67808;67809 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
Novex-2 | 22595 | 68008;68009;68010 | chr2:178547123;178547122;178547121 | chr2:179411850;179411849;179411848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.993 | N | 0.686 | 0.367 | 0.514866526686 | gnomAD-4.0.0 | 4.10523E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 5.20291E-04 | 2.69843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6613 | likely_pathogenic | 0.5802 | pathogenic | -2.491 | Highly Destabilizing | 0.707 | D | 0.522 | neutral | None | None | None | None | I |
Y/C | 0.1517 | likely_benign | 0.14 | benign | -1.325 | Destabilizing | 0.993 | D | 0.686 | prob.neutral | N | 0.508787457 | None | None | I |
Y/D | 0.8154 | likely_pathogenic | 0.7873 | pathogenic | -2.044 | Highly Destabilizing | 0.975 | D | 0.743 | deleterious | D | 0.525675685 | None | None | I |
Y/E | 0.8708 | likely_pathogenic | 0.8592 | pathogenic | -1.887 | Destabilizing | 0.945 | D | 0.633 | neutral | None | None | None | None | I |
Y/F | 0.0613 | likely_benign | 0.0687 | benign | -0.845 | Destabilizing | 0.006 | N | 0.237 | neutral | N | 0.481638141 | None | None | I |
Y/G | 0.7298 | likely_pathogenic | 0.6535 | pathogenic | -2.878 | Highly Destabilizing | 0.945 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/H | 0.2664 | likely_benign | 0.2463 | benign | -1.382 | Destabilizing | 0.975 | D | 0.543 | neutral | N | 0.486389302 | None | None | I |
Y/I | 0.4815 | ambiguous | 0.4479 | ambiguous | -1.26 | Destabilizing | 0.809 | D | 0.517 | neutral | None | None | None | None | I |
Y/K | 0.7952 | likely_pathogenic | 0.7932 | pathogenic | -1.656 | Destabilizing | 0.945 | D | 0.631 | neutral | None | None | None | None | I |
Y/L | 0.4694 | ambiguous | 0.4401 | ambiguous | -1.26 | Destabilizing | 0.547 | D | 0.437 | neutral | None | None | None | None | I |
Y/M | 0.5663 | likely_pathogenic | 0.5615 | ambiguous | -0.955 | Destabilizing | 0.985 | D | 0.606 | neutral | None | None | None | None | I |
Y/N | 0.5387 | ambiguous | 0.4909 | ambiguous | -2.259 | Highly Destabilizing | 0.975 | D | 0.687 | prob.neutral | D | 0.525422196 | None | None | I |
Y/P | 0.9889 | likely_pathogenic | 0.9875 | pathogenic | -1.674 | Destabilizing | 0.981 | D | 0.757 | deleterious | None | None | None | None | I |
Y/Q | 0.663 | likely_pathogenic | 0.6326 | pathogenic | -2.06 | Highly Destabilizing | 0.981 | D | 0.616 | neutral | None | None | None | None | I |
Y/R | 0.6591 | likely_pathogenic | 0.6327 | pathogenic | -1.37 | Destabilizing | 0.945 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/S | 0.4737 | ambiguous | 0.3998 | ambiguous | -2.711 | Highly Destabilizing | 0.928 | D | 0.628 | neutral | N | 0.513647816 | None | None | I |
Y/T | 0.6192 | likely_pathogenic | 0.5497 | ambiguous | -2.441 | Highly Destabilizing | 0.945 | D | 0.631 | neutral | None | None | None | None | I |
Y/V | 0.3719 | ambiguous | 0.3446 | ambiguous | -1.674 | Destabilizing | 0.547 | D | 0.47 | neutral | None | None | None | None | I |
Y/W | 0.4244 | ambiguous | 0.458 | ambiguous | -0.334 | Destabilizing | 0.985 | D | 0.547 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.