Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3147 | 9664;9665;9666 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
N2AB | 3147 | 9664;9665;9666 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
N2A | 3147 | 9664;9665;9666 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
N2B | 3101 | 9526;9527;9528 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
Novex-1 | 3101 | 9526;9527;9528 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
Novex-2 | 3101 | 9526;9527;9528 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
Novex-3 | 3147 | 9664;9665;9666 | chr2:178767791;178767790;178767789 | chr2:179632518;179632517;179632516 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs150283731 | -0.099 | 0.02 | N | 0.213 | 0.073 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.919 | likely_pathogenic | 0.8911 | pathogenic | -1.364 | Destabilizing | 0.863 | D | 0.483 | neutral | N | 0.315322813 | None | None | N |
V/C | 0.9819 | likely_pathogenic | 0.9769 | pathogenic | -0.889 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | N |
V/D | 0.99 | likely_pathogenic | 0.989 | pathogenic | -1.13 | Destabilizing | 0.997 | D | 0.674 | neutral | N | 0.318447777 | None | None | N |
V/E | 0.9718 | likely_pathogenic | 0.9699 | pathogenic | -1.162 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | N |
V/F | 0.851 | likely_pathogenic | 0.8627 | pathogenic | -1.166 | Destabilizing | 0.982 | D | 0.516 | neutral | N | 0.317257418 | None | None | N |
V/G | 0.943 | likely_pathogenic | 0.9282 | pathogenic | -1.654 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.317993073 | None | None | N |
V/H | 0.9943 | likely_pathogenic | 0.9936 | pathogenic | -1.226 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
V/I | 0.1016 | likely_benign | 0.1236 | benign | -0.684 | Destabilizing | 0.02 | N | 0.213 | neutral | N | 0.353063661 | None | None | N |
V/K | 0.9788 | likely_pathogenic | 0.9784 | pathogenic | -1.156 | Destabilizing | 0.993 | D | 0.628 | neutral | None | None | None | None | N |
V/L | 0.7595 | likely_pathogenic | 0.7799 | pathogenic | -0.684 | Destabilizing | 0.76 | D | 0.361 | neutral | N | 0.314622626 | None | None | N |
V/M | 0.6979 | likely_pathogenic | 0.7414 | pathogenic | -0.468 | Destabilizing | 0.986 | D | 0.473 | neutral | None | None | None | None | N |
V/N | 0.9716 | likely_pathogenic | 0.9696 | pathogenic | -0.861 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
V/P | 0.9876 | likely_pathogenic | 0.9639 | pathogenic | -0.875 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
V/Q | 0.9761 | likely_pathogenic | 0.9756 | pathogenic | -1.063 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
V/R | 0.9706 | likely_pathogenic | 0.9674 | pathogenic | -0.613 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
V/S | 0.9529 | likely_pathogenic | 0.9439 | pathogenic | -1.354 | Destabilizing | 0.993 | D | 0.595 | neutral | None | None | None | None | N |
V/T | 0.8385 | likely_pathogenic | 0.8305 | pathogenic | -1.277 | Destabilizing | 0.953 | D | 0.44 | neutral | None | None | None | None | N |
V/W | 0.9963 | likely_pathogenic | 0.996 | pathogenic | -1.323 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/Y | 0.9836 | likely_pathogenic | 0.9829 | pathogenic | -1.043 | Destabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.