Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31489 | 94690;94691;94692 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
N2AB | 29848 | 89767;89768;89769 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
N2A | 28921 | 86986;86987;86988 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
N2B | 22424 | 67495;67496;67497 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
Novex-1 | 22549 | 67870;67871;67872 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
Novex-2 | 22616 | 68071;68072;68073 | chr2:178547060;178547059;178547058 | chr2:179411787;179411786;179411785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs773485371 | -0.46 | 0.957 | N | 0.443 | 0.304 | 0.237489013734 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7942 | likely_pathogenic | 0.7672 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
A/D | 0.9943 | likely_pathogenic | 0.9931 | pathogenic | -0.654 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | I |
A/E | 0.9837 | likely_pathogenic | 0.9807 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.493663322 | None | None | I |
A/F | 0.9259 | likely_pathogenic | 0.9237 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
A/G | 0.6065 | likely_pathogenic | 0.5435 | ambiguous | -0.327 | Destabilizing | 0.996 | D | 0.57 | neutral | N | 0.491434823 | None | None | I |
A/H | 0.9833 | likely_pathogenic | 0.9778 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
A/I | 0.7463 | likely_pathogenic | 0.7879 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
A/K | 0.9932 | likely_pathogenic | 0.9916 | pathogenic | -0.664 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/L | 0.8309 | likely_pathogenic | 0.8338 | pathogenic | -0.459 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/M | 0.8347 | likely_pathogenic | 0.8432 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
A/N | 0.9721 | likely_pathogenic | 0.9668 | pathogenic | -0.406 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
A/P | 0.9881 | likely_pathogenic | 0.9859 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.530685207 | None | None | I |
A/Q | 0.9649 | likely_pathogenic | 0.956 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
A/R | 0.9743 | likely_pathogenic | 0.9685 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
A/S | 0.2861 | likely_benign | 0.2606 | benign | -0.584 | Destabilizing | 0.957 | D | 0.443 | neutral | N | 0.482929354 | None | None | I |
A/T | 0.6451 | likely_pathogenic | 0.6555 | pathogenic | -0.667 | Destabilizing | 0.996 | D | 0.697 | prob.neutral | N | 0.503173203 | None | None | I |
A/V | 0.3793 | ambiguous | 0.4384 | ambiguous | -0.381 | Destabilizing | 0.998 | D | 0.745 | deleterious | N | 0.508552597 | None | None | I |
A/W | 0.9931 | likely_pathogenic | 0.9927 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
A/Y | 0.9738 | likely_pathogenic | 0.97 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.