Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31491 | 94696;94697;94698 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
N2AB | 29850 | 89773;89774;89775 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
N2A | 28923 | 86992;86993;86994 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
N2B | 22426 | 67501;67502;67503 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
Novex-1 | 22551 | 67876;67877;67878 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
Novex-2 | 22618 | 68077;68078;68079 | chr2:178547054;178547053;178547052 | chr2:179411781;179411780;179411779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.028 | N | 0.39 | 0.167 | 0.717020191167 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.25 | likely_benign | 0.2483 | benign | -1.531 | Destabilizing | 0.625 | D | 0.492 | neutral | N | 0.458294348 | None | None | I |
V/C | 0.6895 | likely_pathogenic | 0.6509 | pathogenic | -1.005 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
V/D | 0.6543 | likely_pathogenic | 0.6551 | pathogenic | -0.908 | Destabilizing | 0.989 | D | 0.663 | neutral | N | 0.496716663 | None | None | I |
V/E | 0.4673 | ambiguous | 0.4594 | ambiguous | -0.858 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | I |
V/F | 0.182 | likely_benign | 0.1849 | benign | -1.067 | Destabilizing | 0.028 | N | 0.39 | neutral | N | 0.466009754 | None | None | I |
V/G | 0.3787 | ambiguous | 0.3724 | ambiguous | -1.899 | Destabilizing | 0.989 | D | 0.655 | neutral | N | 0.478847068 | None | None | I |
V/H | 0.6978 | likely_pathogenic | 0.6799 | pathogenic | -1.307 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | I |
V/I | 0.0639 | likely_benign | 0.0647 | benign | -0.605 | Destabilizing | 0.005 | N | 0.234 | neutral | N | 0.442940893 | None | None | I |
V/K | 0.5261 | ambiguous | 0.521 | ambiguous | -1.046 | Destabilizing | 0.974 | D | 0.659 | neutral | None | None | None | None | I |
V/L | 0.147 | likely_benign | 0.1341 | benign | -0.605 | Destabilizing | 0.005 | N | 0.236 | neutral | N | 0.399419402 | None | None | I |
V/M | 0.1235 | likely_benign | 0.1225 | benign | -0.505 | Destabilizing | 0.949 | D | 0.618 | neutral | None | None | None | None | I |
V/N | 0.4 | ambiguous | 0.3934 | ambiguous | -0.918 | Destabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | I |
V/P | 0.4697 | ambiguous | 0.4074 | ambiguous | -0.879 | Destabilizing | 0.991 | D | 0.656 | neutral | None | None | None | None | I |
V/Q | 0.4423 | ambiguous | 0.4134 | ambiguous | -1.007 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | I |
V/R | 0.5138 | ambiguous | 0.5153 | ambiguous | -0.62 | Destabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | I |
V/S | 0.3292 | likely_benign | 0.3203 | benign | -1.584 | Destabilizing | 0.974 | D | 0.651 | neutral | None | None | None | None | I |
V/T | 0.2374 | likely_benign | 0.2429 | benign | -1.406 | Destabilizing | 0.842 | D | 0.49 | neutral | None | None | None | None | I |
V/W | 0.8141 | likely_pathogenic | 0.7977 | pathogenic | -1.254 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | I |
V/Y | 0.5327 | ambiguous | 0.514 | ambiguous | -0.943 | Destabilizing | 0.904 | D | 0.62 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.