Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31496 | 94711;94712;94713 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
N2AB | 29855 | 89788;89789;89790 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
N2A | 28928 | 87007;87008;87009 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
N2B | 22431 | 67516;67517;67518 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
Novex-1 | 22556 | 67891;67892;67893 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
Novex-2 | 22623 | 68092;68093;68094 | chr2:178547039;178547038;178547037 | chr2:179411766;179411765;179411764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs769175534 | -0.12 | 0.998 | N | 0.58 | 0.365 | 0.327686398923 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 3.27E-05 | None | 4.66E-05 | 2.67E-05 | 1.66113E-04 |
E/K | rs769175534 | -0.12 | 0.998 | N | 0.58 | 0.365 | 0.327686398923 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs769175534 | -0.12 | 0.998 | N | 0.58 | 0.365 | 0.327686398923 | gnomAD-4.0.0 | 1.30175E-05 | None | None | None | None | N | None | 0 | 5.00183E-05 | None | 0 | 2.22806E-05 | None | 0 | 0 | 1.01747E-05 | 2.1964E-05 | 4.8043E-05 |
E/Q | None | None | 1.0 | N | 0.603 | 0.253 | 0.412587454835 | gnomAD-4.0.0 | 6.84448E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99782E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4904 | ambiguous | 0.4546 | ambiguous | -0.429 | Destabilizing | 0.976 | D | 0.587 | neutral | N | 0.481115279 | None | None | N |
E/C | 0.9813 | likely_pathogenic | 0.9771 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.726 | deleterious | None | None | None | None | N |
E/D | 0.3061 | likely_benign | 0.2417 | benign | -0.354 | Destabilizing | 0.988 | D | 0.565 | neutral | N | 0.457814345 | None | None | N |
E/F | 0.967 | likely_pathogenic | 0.962 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/G | 0.6069 | likely_pathogenic | 0.5776 | pathogenic | -0.616 | Destabilizing | 0.114 | N | 0.531 | neutral | D | 0.523308618 | None | None | N |
E/H | 0.9108 | likely_pathogenic | 0.8916 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
E/I | 0.7827 | likely_pathogenic | 0.7712 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.6543 | likely_pathogenic | 0.6128 | pathogenic | 0.38 | Stabilizing | 0.998 | D | 0.58 | neutral | N | 0.427686226 | None | None | N |
E/L | 0.8053 | likely_pathogenic | 0.7844 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.691 | prob.delet. | None | None | None | None | N |
E/M | 0.8532 | likely_pathogenic | 0.8462 | pathogenic | 0.17 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/N | 0.7872 | likely_pathogenic | 0.7345 | pathogenic | 0.04 | Stabilizing | 0.997 | D | 0.596 | neutral | None | None | None | None | N |
E/P | 0.8071 | likely_pathogenic | 0.7516 | pathogenic | -0.104 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.4928 | ambiguous | 0.4571 | ambiguous | 0.064 | Stabilizing | 1.0 | D | 0.603 | neutral | N | 0.512091547 | None | None | N |
E/R | 0.7745 | likely_pathogenic | 0.7446 | pathogenic | 0.551 | Stabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
E/S | 0.6657 | likely_pathogenic | 0.6245 | pathogenic | -0.11 | Destabilizing | 0.982 | D | 0.578 | neutral | None | None | None | None | N |
E/T | 0.7329 | likely_pathogenic | 0.6948 | pathogenic | 0.047 | Stabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
E/V | 0.5828 | likely_pathogenic | 0.5633 | ambiguous | -0.104 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.466595845 | None | None | N |
E/W | 0.9912 | likely_pathogenic | 0.989 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.722 | deleterious | None | None | None | None | N |
E/Y | 0.9396 | likely_pathogenic | 0.929 | pathogenic | -0.086 | Destabilizing | 0.999 | D | 0.723 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.