Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31498 | 94717;94718;94719 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
N2AB | 29857 | 89794;89795;89796 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
N2A | 28930 | 87013;87014;87015 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
N2B | 22433 | 67522;67523;67524 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
Novex-1 | 22558 | 67897;67898;67899 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
Novex-2 | 22625 | 68098;68099;68100 | chr2:178547033;178547032;178547031 | chr2:179411760;179411759;179411758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1281357207 | 0.215 | 0.999 | N | 0.651 | 0.444 | 0.425970041486 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
S/L | rs1281357207 | 0.215 | 0.999 | N | 0.651 | 0.444 | 0.425970041486 | gnomAD-4.0.0 | 1.36918E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7999E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4594 | ambiguous | 0.4542 | ambiguous | -0.661 | Destabilizing | 0.994 | D | 0.483 | neutral | N | 0.506381845 | None | None | I |
S/C | 0.3181 | likely_benign | 0.2972 | benign | -0.457 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
S/D | 0.994 | likely_pathogenic | 0.9947 | pathogenic | -0.939 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | I |
S/E | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -0.796 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/F | 0.9906 | likely_pathogenic | 0.9922 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
S/G | 0.5168 | ambiguous | 0.5316 | ambiguous | -1.04 | Destabilizing | 0.998 | D | 0.495 | neutral | None | None | None | None | I |
S/H | 0.9922 | likely_pathogenic | 0.9925 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
S/I | 0.9728 | likely_pathogenic | 0.9725 | pathogenic | 0.282 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
S/K | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -0.5 | Destabilizing | 0.998 | D | 0.671 | prob.neutral | None | None | None | None | I |
S/L | 0.8892 | likely_pathogenic | 0.8805 | pathogenic | 0.282 | Stabilizing | 0.999 | D | 0.651 | prob.neutral | N | 0.507240764 | None | None | I |
S/M | 0.9276 | likely_pathogenic | 0.9246 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
S/N | 0.9599 | likely_pathogenic | 0.9581 | pathogenic | -0.921 | Destabilizing | 0.998 | D | 0.687 | prob.delet. | None | None | None | None | I |
S/P | 0.9949 | likely_pathogenic | 0.9952 | pathogenic | 0.004 | Stabilizing | 0.999 | D | 0.684 | prob.delet. | N | 0.517372983 | None | None | I |
S/Q | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -0.752 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/R | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -0.761 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
S/T | 0.2475 | likely_benign | 0.2214 | benign | -0.679 | Destabilizing | 0.997 | D | 0.561 | neutral | N | 0.478060147 | None | None | I |
S/V | 0.9105 | likely_pathogenic | 0.9062 | pathogenic | 0.004 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
S/W | 0.9953 | likely_pathogenic | 0.9961 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.669 | prob.neutral | None | None | None | None | I |
S/Y | 0.9925 | likely_pathogenic | 0.9939 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.657 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.