Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31499 | 94720;94721;94722 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
N2AB | 29858 | 89797;89798;89799 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
N2A | 28931 | 87016;87017;87018 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
N2B | 22434 | 67525;67526;67527 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
Novex-1 | 22559 | 67900;67901;67902 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
Novex-2 | 22626 | 68101;68102;68103 | chr2:178547030;178547029;178547028 | chr2:179411757;179411756;179411755 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.999 | N | 0.779 | 0.404 | 0.375861065471 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.64 | likely_pathogenic | 0.6778 | pathogenic | 0.086 | Stabilizing | 0.998 | D | 0.655 | prob.neutral | None | None | None | None | I |
R/C | 0.3679 | ambiguous | 0.407 | ambiguous | -0.218 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
R/D | 0.8501 | likely_pathogenic | 0.867 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | I |
R/E | 0.628 | likely_pathogenic | 0.6631 | pathogenic | -0.218 | Destabilizing | 0.998 | D | 0.693 | prob.delet. | None | None | None | None | I |
R/F | 0.7373 | likely_pathogenic | 0.7646 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
R/G | 0.4988 | ambiguous | 0.543 | ambiguous | -0.062 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.417717162 | None | None | I |
R/H | 0.1866 | likely_benign | 0.2053 | benign | -0.594 | Destabilizing | 0.999 | D | 0.738 | deleterious | None | None | None | None | I |
R/I | 0.5141 | ambiguous | 0.5441 | ambiguous | 0.431 | Stabilizing | 0.999 | D | 0.779 | deleterious | N | 0.478802906 | None | None | I |
R/K | 0.1267 | likely_benign | 0.1347 | benign | -0.11 | Destabilizing | 0.994 | D | 0.634 | neutral | N | 0.375523822 | None | None | I |
R/L | 0.4137 | ambiguous | 0.4475 | ambiguous | 0.431 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
R/M | 0.5399 | ambiguous | 0.5805 | pathogenic | -0.051 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
R/N | 0.8057 | likely_pathogenic | 0.8265 | pathogenic | -0.043 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | I |
R/P | 0.6237 | likely_pathogenic | 0.6402 | pathogenic | 0.335 | Stabilizing | 0.999 | D | 0.736 | deleterious | None | None | None | None | I |
R/Q | 0.1832 | likely_benign | 0.2 | benign | -0.066 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
R/S | 0.7332 | likely_pathogenic | 0.7664 | pathogenic | -0.217 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.436974926 | None | None | I |
R/T | 0.5657 | likely_pathogenic | 0.6037 | pathogenic | -0.057 | Destabilizing | 0.999 | D | 0.759 | deleterious | N | 0.448402641 | None | None | I |
R/V | 0.5844 | likely_pathogenic | 0.6119 | pathogenic | 0.335 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
R/W | 0.3133 | likely_benign | 0.3473 | ambiguous | -0.418 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
R/Y | 0.5718 | likely_pathogenic | 0.5979 | pathogenic | None | Stabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.