Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31502 | 94729;94730;94731 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
N2AB | 29861 | 89806;89807;89808 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
N2A | 28934 | 87025;87026;87027 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
N2B | 22437 | 67534;67535;67536 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
Novex-1 | 22562 | 67909;67910;67911 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
Novex-2 | 22629 | 68110;68111;68112 | chr2:178547021;178547020;178547019 | chr2:179411748;179411747;179411746 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.023 | N | 0.391 | 0.243 | 0.413241256734 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2936 | likely_benign | 0.2985 | benign | -1.272 | Destabilizing | 0.003 | N | 0.287 | neutral | None | None | None | None | N |
M/C | 0.656 | likely_pathogenic | 0.6694 | pathogenic | -1.017 | Destabilizing | 0.352 | N | 0.332 | neutral | None | None | None | None | N |
M/D | 0.9108 | likely_pathogenic | 0.9298 | pathogenic | -0.244 | Destabilizing | 0.134 | N | 0.649 | prob.neutral | None | None | None | None | N |
M/E | 0.6354 | likely_pathogenic | 0.7014 | pathogenic | -0.249 | Destabilizing | 0.134 | N | 0.477 | neutral | None | None | None | None | N |
M/F | 0.3752 | ambiguous | 0.4009 | ambiguous | -0.459 | Destabilizing | 0.071 | N | 0.224 | neutral | None | None | None | None | N |
M/G | 0.6568 | likely_pathogenic | 0.6627 | pathogenic | -1.539 | Destabilizing | 0.06 | N | 0.421 | neutral | None | None | None | None | N |
M/H | 0.5983 | likely_pathogenic | 0.6269 | pathogenic | -0.526 | Destabilizing | 0.624 | D | 0.44 | neutral | None | None | None | None | N |
M/I | 0.2245 | likely_benign | 0.2547 | benign | -0.617 | Destabilizing | 0.001 | N | 0.169 | neutral | N | 0.396128381 | None | None | N |
M/K | 0.2506 | likely_benign | 0.2877 | benign | -0.236 | Destabilizing | 0.046 | N | 0.328 | neutral | N | 0.387567613 | None | None | N |
M/L | 0.103 | likely_benign | 0.1025 | benign | -0.617 | Destabilizing | None | N | 0.037 | neutral | N | 0.356185913 | None | None | N |
M/N | 0.5945 | likely_pathogenic | 0.6349 | pathogenic | -0.105 | Destabilizing | 0.321 | N | 0.635 | neutral | None | None | None | None | N |
M/P | 0.5076 | ambiguous | 0.5447 | ambiguous | -0.807 | Destabilizing | 0.321 | N | 0.606 | neutral | None | None | None | None | N |
M/Q | 0.3006 | likely_benign | 0.3141 | benign | -0.239 | Destabilizing | 0.321 | N | 0.384 | neutral | None | None | None | None | N |
M/R | 0.2495 | likely_benign | 0.2812 | benign | 0.328 | Stabilizing | 0.105 | N | 0.505 | neutral | N | 0.406153374 | None | None | N |
M/S | 0.443 | ambiguous | 0.4597 | ambiguous | -0.67 | Destabilizing | 0.031 | N | 0.325 | neutral | None | None | None | None | N |
M/T | 0.1429 | likely_benign | 0.1581 | benign | -0.566 | Destabilizing | 0.023 | N | 0.391 | neutral | N | 0.321755548 | None | None | N |
M/V | 0.0607 | likely_benign | 0.0631 | benign | -0.807 | Destabilizing | None | N | 0.047 | neutral | N | 0.31022155 | None | None | N |
M/W | 0.7164 | likely_pathogenic | 0.7353 | pathogenic | -0.376 | Destabilizing | 0.862 | D | 0.352 | neutral | None | None | None | None | N |
M/Y | 0.655 | likely_pathogenic | 0.69 | pathogenic | -0.36 | Destabilizing | 0.134 | N | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.