Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31505 | 94738;94739;94740 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
N2AB | 29864 | 89815;89816;89817 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
N2A | 28937 | 87034;87035;87036 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
N2B | 22440 | 67543;67544;67545 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
Novex-1 | 22565 | 67918;67919;67920 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
Novex-2 | 22632 | 68119;68120;68121 | chr2:178547012;178547011;178547010 | chr2:179411739;179411738;179411737 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs755756435 | 0.437 | 0.997 | N | 0.723 | 0.285 | 0.380564188046 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.94E-05 | None | 0 | 0 | 0 |
N/T | rs755756435 | 0.437 | 0.997 | N | 0.723 | 0.285 | 0.380564188046 | gnomAD-4.0.0 | 3.43351E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.82099E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6096 | likely_pathogenic | 0.6475 | pathogenic | -0.282 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
N/C | 0.6587 | likely_pathogenic | 0.6948 | pathogenic | 0.357 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
N/D | 0.257 | likely_benign | 0.3165 | benign | 0.033 | Stabilizing | 0.997 | D | 0.645 | neutral | N | 0.359757441 | None | None | I |
N/E | 0.7724 | likely_pathogenic | 0.8365 | pathogenic | -0.016 | Destabilizing | 0.998 | D | 0.729 | deleterious | None | None | None | None | I |
N/F | 0.8214 | likely_pathogenic | 0.8457 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.739 | deleterious | None | None | None | None | I |
N/G | 0.6743 | likely_pathogenic | 0.7133 | pathogenic | -0.43 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | I |
N/H | 0.2705 | likely_benign | 0.3049 | benign | -0.505 | Destabilizing | 0.999 | D | 0.795 | deleterious | D | 0.531784534 | None | None | I |
N/I | 0.5142 | ambiguous | 0.5999 | pathogenic | 0.015 | Stabilizing | 0.999 | D | 0.739 | deleterious | N | 0.521183538 | None | None | I |
N/K | 0.7673 | likely_pathogenic | 0.8539 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.741 | deleterious | N | 0.50605937 | None | None | I |
N/L | 0.4792 | ambiguous | 0.5356 | ambiguous | 0.015 | Stabilizing | 0.999 | D | 0.687 | prob.delet. | None | None | None | None | I |
N/M | 0.6047 | likely_pathogenic | 0.6642 | pathogenic | 0.372 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
N/P | 0.8732 | likely_pathogenic | 0.8627 | pathogenic | -0.059 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | I |
N/Q | 0.6925 | likely_pathogenic | 0.7635 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
N/R | 0.8356 | likely_pathogenic | 0.8934 | pathogenic | 0.184 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | I |
N/S | 0.1876 | likely_benign | 0.2027 | benign | -0.071 | Destabilizing | 0.997 | D | 0.555 | neutral | N | 0.466924979 | None | None | I |
N/T | 0.3732 | ambiguous | 0.4358 | ambiguous | 0.012 | Stabilizing | 0.997 | D | 0.723 | deleterious | N | 0.465751543 | None | None | I |
N/V | 0.5597 | ambiguous | 0.631 | pathogenic | -0.059 | Destabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | I |
N/W | 0.9429 | likely_pathogenic | 0.9559 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.739 | deleterious | None | None | None | None | I |
N/Y | 0.333 | likely_benign | 0.3823 | ambiguous | -0.474 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.49990579 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.