Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31511 | 94756;94757;94758 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
N2AB | 29870 | 89833;89834;89835 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
N2A | 28943 | 87052;87053;87054 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
N2B | 22446 | 67561;67562;67563 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
Novex-1 | 22571 | 67936;67937;67938 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
Novex-2 | 22638 | 68137;68138;68139 | chr2:178546897;178546896;178546895 | chr2:179411624;179411623;179411622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | N | 0.818 | 0.429 | 0.446010312102 | gnomAD-4.0.0 | 1.66789E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.80568E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.367 | ambiguous | 0.3146 | benign | -0.829 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.483307748 | None | None | N |
G/C | 0.5869 | likely_pathogenic | 0.4558 | ambiguous | -1.152 | Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.526962224 | None | None | N |
G/D | 0.7887 | likely_pathogenic | 0.716 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.482257791 | None | None | N |
G/E | 0.7334 | likely_pathogenic | 0.6326 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
G/F | 0.9341 | likely_pathogenic | 0.8981 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/H | 0.8758 | likely_pathogenic | 0.8072 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
G/I | 0.8531 | likely_pathogenic | 0.7621 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
G/K | 0.8724 | likely_pathogenic | 0.7979 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
G/L | 0.8312 | likely_pathogenic | 0.7435 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
G/M | 0.8756 | likely_pathogenic | 0.8126 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
G/N | 0.7632 | likely_pathogenic | 0.6873 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
G/P | 0.9753 | likely_pathogenic | 0.9548 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
G/Q | 0.7435 | likely_pathogenic | 0.6462 | pathogenic | -1.283 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
G/R | 0.7731 | likely_pathogenic | 0.6705 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.465720017 | None | None | N |
G/S | 0.217 | likely_benign | 0.1903 | benign | -1.431 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.507069729 | None | None | N |
G/T | 0.4836 | ambiguous | 0.4177 | ambiguous | -1.355 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
G/V | 0.7199 | likely_pathogenic | 0.6062 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.487777973 | None | None | N |
G/W | 0.9207 | likely_pathogenic | 0.8759 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/Y | 0.9147 | likely_pathogenic | 0.8658 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.