Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31514 | 94765;94766;94767 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
N2AB | 29873 | 89842;89843;89844 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
N2A | 28946 | 87061;87062;87063 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
N2B | 22449 | 67570;67571;67572 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
Novex-1 | 22574 | 67945;67946;67947 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
Novex-2 | 22641 | 68146;68147;68148 | chr2:178546888;178546887;178546886 | chr2:179411615;179411614;179411613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1697413804 | None | 1.0 | N | 0.663 | 0.269 | 0.346768085243 | gnomAD-4.0.0 | 1.65961E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9931E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2793 | likely_benign | 0.2343 | benign | -0.633 | Destabilizing | 0.996 | D | 0.631 | neutral | N | 0.473584057 | None | None | N |
E/C | 0.9072 | likely_pathogenic | 0.8828 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2436 | likely_benign | 0.2135 | benign | -0.747 | Destabilizing | 0.998 | D | 0.549 | neutral | N | 0.467089597 | None | None | N |
E/F | 0.8525 | likely_pathogenic | 0.8069 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/G | 0.5052 | ambiguous | 0.4413 | ambiguous | -0.944 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.495905048 | None | None | N |
E/H | 0.6247 | likely_pathogenic | 0.5476 | ambiguous | -0.175 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/I | 0.356 | ambiguous | 0.2939 | benign | 0.196 | Stabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
E/K | 0.2656 | likely_benign | 0.2235 | benign | -0.259 | Destabilizing | 0.998 | D | 0.575 | neutral | N | 0.508723168 | None | None | N |
E/L | 0.5064 | ambiguous | 0.4442 | ambiguous | 0.196 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/M | 0.5216 | ambiguous | 0.453 | ambiguous | 0.369 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.4486 | ambiguous | 0.3769 | ambiguous | -0.721 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
E/P | 0.9854 | likely_pathogenic | 0.9771 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/Q | 0.1802 | likely_benign | 0.1559 | benign | -0.612 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.519729596 | None | None | N |
E/R | 0.3977 | ambiguous | 0.3431 | ambiguous | 0.063 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/S | 0.3679 | ambiguous | 0.3027 | benign | -0.947 | Destabilizing | 0.994 | D | 0.578 | neutral | None | None | None | None | N |
E/T | 0.3092 | likely_benign | 0.2537 | benign | -0.693 | Destabilizing | 0.813 | D | 0.451 | neutral | None | None | None | None | N |
E/V | 0.1967 | likely_benign | 0.1675 | benign | -0.059 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | N | 0.484675659 | None | None | N |
E/W | 0.9569 | likely_pathogenic | 0.9429 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/Y | 0.7965 | likely_pathogenic | 0.7345 | pathogenic | 0.128 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.