Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31515 | 94768;94769;94770 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
N2AB | 29874 | 89845;89846;89847 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
N2A | 28947 | 87064;87065;87066 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
N2B | 22450 | 67573;67574;67575 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
Novex-1 | 22575 | 67948;67949;67950 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
Novex-2 | 22642 | 68149;68150;68151 | chr2:178546885;178546884;178546883 | chr2:179411612;179411611;179411610 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | N | 0.644 | 0.413 | 0.533904276971 | gnomAD-4.0.0 | 2.78047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.64544E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6315 | likely_pathogenic | 0.586 | pathogenic | -1.313 | Destabilizing | 0.998 | D | 0.644 | neutral | N | 0.462550948 | None | None | N |
V/C | 0.9433 | likely_pathogenic | 0.9422 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
V/D | 0.9823 | likely_pathogenic | 0.9823 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/E | 0.9423 | likely_pathogenic | 0.9436 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.512308371 | None | None | N |
V/F | 0.7569 | likely_pathogenic | 0.779 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/G | 0.8549 | likely_pathogenic | 0.8373 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.522650718 | None | None | N |
V/H | 0.9895 | likely_pathogenic | 0.9898 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/I | 0.0907 | likely_benign | 0.0931 | benign | -0.574 | Destabilizing | 0.813 | D | 0.333 | neutral | None | None | None | None | N |
V/K | 0.966 | likely_pathogenic | 0.9615 | pathogenic | -1.146 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/L | 0.666 | likely_pathogenic | 0.6678 | pathogenic | -0.574 | Destabilizing | 0.981 | D | 0.533 | neutral | D | 0.526679784 | None | None | N |
V/M | 0.558 | ambiguous | 0.5452 | ambiguous | -0.532 | Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.504711048 | None | None | N |
V/N | 0.9586 | likely_pathogenic | 0.9541 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.7176 | likely_pathogenic | 0.6891 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Q | 0.9604 | likely_pathogenic | 0.9584 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9599 | likely_pathogenic | 0.957 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/S | 0.9109 | likely_pathogenic | 0.8943 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/T | 0.8041 | likely_pathogenic | 0.7743 | pathogenic | -1.369 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/W | 0.9905 | likely_pathogenic | 0.9921 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.955 | likely_pathogenic | 0.961 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.