Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31523 | 94792;94793;94794 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
N2AB | 29882 | 89869;89870;89871 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
N2A | 28955 | 87088;87089;87090 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
N2B | 22458 | 67597;67598;67599 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
Novex-1 | 22583 | 67972;67973;67974 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
Novex-2 | 22650 | 68173;68174;68175 | chr2:178546861;178546860;178546859 | chr2:179411588;179411587;179411586 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.543 | N | 0.308 | 0.208 | 0.504907739247 | gnomAD-4.0.0 | 1.62656E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45607E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6085 | likely_pathogenic | 0.4637 | ambiguous | -2.363 | Highly Destabilizing | 0.543 | D | 0.308 | neutral | N | 0.501127979 | None | None | N |
V/C | 0.9407 | likely_pathogenic | 0.9294 | pathogenic | -2.585 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -2.997 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
V/E | 0.998 | likely_pathogenic | 0.997 | pathogenic | -2.751 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | D | 0.539665337 | None | None | N |
V/F | 0.9611 | likely_pathogenic | 0.9605 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
V/G | 0.9569 | likely_pathogenic | 0.9301 | pathogenic | -2.933 | Highly Destabilizing | 0.997 | D | 0.827 | deleterious | D | 0.533081971 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.667 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.1373 | likely_benign | 0.1489 | benign | -0.753 | Destabilizing | 0.987 | D | 0.513 | neutral | N | 0.486115667 | None | None | N |
V/K | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -2.083 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.7772 | likely_pathogenic | 0.79 | pathogenic | -0.753 | Destabilizing | 0.973 | D | 0.621 | neutral | N | 0.470746447 | None | None | N |
V/M | 0.7972 | likely_pathogenic | 0.7893 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/N | 0.9977 | likely_pathogenic | 0.9964 | pathogenic | -2.563 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -1.264 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/Q | 0.9964 | likely_pathogenic | 0.995 | pathogenic | -2.358 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/R | 0.996 | likely_pathogenic | 0.9946 | pathogenic | -1.94 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
V/S | 0.9641 | likely_pathogenic | 0.9345 | pathogenic | -3.251 | Highly Destabilizing | 0.995 | D | 0.852 | deleterious | None | None | None | None | N |
V/T | 0.9019 | likely_pathogenic | 0.8431 | pathogenic | -2.836 | Highly Destabilizing | 0.992 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/W | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.011 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.9974 | likely_pathogenic | 0.9971 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.