Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31524 | 94795;94796;94797 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
N2AB | 29883 | 89872;89873;89874 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
N2A | 28956 | 87091;87092;87093 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
N2B | 22459 | 67600;67601;67602 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
Novex-1 | 22584 | 67975;67976;67977 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
Novex-2 | 22651 | 68176;68177;68178 | chr2:178546858;178546857;178546856 | chr2:179411585;179411584;179411583 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs796571658 | None | 0.217 | N | 0.527 | 0.33 | 0.536756967961 | gnomAD-4.0.0 | 3.24899E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.87096E-06 | 0 | 0 |
S/P | rs1697398361 | None | 0.999 | N | 0.658 | 0.447 | 0.453772157364 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2323 | likely_benign | 0.2177 | benign | -0.831 | Destabilizing | 0.987 | D | 0.449 | neutral | N | 0.48787068 | None | None | N |
S/C | 0.2672 | likely_benign | 0.2572 | benign | -0.671 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/D | 0.9035 | likely_pathogenic | 0.8816 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | N |
S/E | 0.9422 | likely_pathogenic | 0.9308 | pathogenic | -0.727 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
S/F | 0.7887 | likely_pathogenic | 0.7499 | pathogenic | -0.79 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
S/G | 0.289 | likely_benign | 0.2848 | benign | -1.16 | Destabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | N |
S/H | 0.73 | likely_pathogenic | 0.6977 | pathogenic | -1.544 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
S/I | 0.794 | likely_pathogenic | 0.7909 | pathogenic | -0.033 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
S/K | 0.9649 | likely_pathogenic | 0.9584 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | N |
S/L | 0.477 | ambiguous | 0.436 | ambiguous | -0.033 | Destabilizing | 0.217 | N | 0.527 | neutral | N | 0.500010471 | None | None | N |
S/M | 0.5733 | likely_pathogenic | 0.5549 | ambiguous | 0.04 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/N | 0.4994 | ambiguous | 0.4706 | ambiguous | -0.8 | Destabilizing | 1.0 | D | 0.554 | neutral | None | None | None | None | N |
S/P | 0.9936 | likely_pathogenic | 0.9926 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.491919029 | None | None | N |
S/Q | 0.8444 | likely_pathogenic | 0.824 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
S/R | 0.9407 | likely_pathogenic | 0.9309 | pathogenic | -0.603 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/T | 0.1639 | likely_benign | 0.1611 | benign | -0.665 | Destabilizing | 0.994 | D | 0.502 | neutral | N | 0.391610783 | None | None | N |
S/V | 0.7059 | likely_pathogenic | 0.6864 | pathogenic | -0.265 | Destabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | N |
S/W | 0.8518 | likely_pathogenic | 0.8351 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/Y | 0.6963 | likely_pathogenic | 0.6484 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.