Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31525 | 94798;94799;94800 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
N2AB | 29884 | 89875;89876;89877 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
N2A | 28957 | 87094;87095;87096 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
N2B | 22460 | 67603;67604;67605 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
Novex-1 | 22585 | 67978;67979;67980 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
Novex-2 | 22652 | 68179;68180;68181 | chr2:178546855;178546854;178546853 | chr2:179411582;179411581;179411580 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1297210935 | None | 0.999 | D | 0.688 | 0.455 | 0.725964355292 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.13E-06 | 0 |
L/M | rs1297210935 | None | 0.999 | D | 0.688 | 0.455 | 0.725964355292 | gnomAD-4.0.0 | 1.62134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93011E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9793 | likely_pathogenic | 0.9734 | pathogenic | -2.509 | Highly Destabilizing | 0.994 | D | 0.671 | neutral | None | None | None | None | N |
L/C | 0.9525 | likely_pathogenic | 0.9459 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.078 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/E | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.753 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/F | 0.8747 | likely_pathogenic | 0.8597 | pathogenic | -1.486 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/G | 0.9978 | likely_pathogenic | 0.9974 | pathogenic | -3.092 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/H | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -2.93 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/I | 0.1701 | likely_benign | 0.1369 | benign | -0.734 | Destabilizing | 0.833 | D | 0.319 | neutral | None | None | None | None | N |
L/K | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/M | 0.3882 | ambiguous | 0.3492 | ambiguous | -0.845 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | D | 0.530446442 | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.514 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.569225846 | None | None | N |
L/Q | 0.9965 | likely_pathogenic | 0.9959 | pathogenic | -2.083 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.569225846 | None | None | N |
L/R | 0.9965 | likely_pathogenic | 0.9961 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.569225846 | None | None | N |
L/S | 0.9982 | likely_pathogenic | 0.9977 | pathogenic | -2.913 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/T | 0.9873 | likely_pathogenic | 0.9833 | pathogenic | -2.426 | Highly Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/V | 0.2014 | likely_benign | 0.1694 | benign | -1.32 | Destabilizing | 0.962 | D | 0.597 | neutral | N | 0.48155391 | None | None | N |
L/W | 0.9962 | likely_pathogenic | 0.9957 | pathogenic | -1.802 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/Y | 0.9952 | likely_pathogenic | 0.9947 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.