Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31533 | 94822;94823;94824 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
N2AB | 29892 | 89899;89900;89901 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
N2A | 28965 | 87118;87119;87120 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
N2B | 22468 | 67627;67628;67629 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
Novex-1 | 22593 | 68002;68003;68004 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
Novex-2 | 22660 | 68203;68204;68205 | chr2:178546831;178546830;178546829 | chr2:179411558;179411557;179411556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.978 | N | 0.673 | 0.541 | 0.499473279415 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8341 | likely_pathogenic | 0.8903 | pathogenic | -0.67 | Destabilizing | 0.957 | D | 0.648 | neutral | N | 0.495691238 | None | None | N |
D/C | 0.9685 | likely_pathogenic | 0.9821 | pathogenic | -0.25 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
D/E | 0.8337 | likely_pathogenic | 0.8477 | pathogenic | -0.674 | Destabilizing | 0.039 | N | 0.316 | neutral | N | 0.487435578 | None | None | N |
D/F | 0.9807 | likely_pathogenic | 0.9895 | pathogenic | -0.509 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
D/G | 0.8061 | likely_pathogenic | 0.87 | pathogenic | -0.998 | Destabilizing | 0.928 | D | 0.638 | neutral | N | 0.513670589 | None | None | N |
D/H | 0.8908 | likely_pathogenic | 0.9213 | pathogenic | -0.906 | Destabilizing | 0.997 | D | 0.68 | prob.neutral | N | 0.511264279 | None | None | N |
D/I | 0.9644 | likely_pathogenic | 0.9765 | pathogenic | 0.191 | Stabilizing | 0.992 | D | 0.662 | neutral | None | None | None | None | N |
D/K | 0.9699 | likely_pathogenic | 0.9796 | pathogenic | -0.434 | Destabilizing | 0.968 | D | 0.647 | neutral | None | None | None | None | N |
D/L | 0.9459 | likely_pathogenic | 0.967 | pathogenic | 0.191 | Stabilizing | 0.983 | D | 0.666 | neutral | None | None | None | None | N |
D/M | 0.9845 | likely_pathogenic | 0.9894 | pathogenic | 0.706 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
D/N | 0.2427 | likely_benign | 0.2923 | benign | -0.786 | Destabilizing | 0.978 | D | 0.721 | prob.delet. | D | 0.522503329 | None | None | N |
D/P | 0.974 | likely_pathogenic | 0.9787 | pathogenic | -0.072 | Destabilizing | 0.992 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/Q | 0.941 | likely_pathogenic | 0.9595 | pathogenic | -0.663 | Destabilizing | 0.968 | D | 0.773 | deleterious | None | None | None | None | N |
D/R | 0.9593 | likely_pathogenic | 0.9742 | pathogenic | -0.386 | Destabilizing | 0.983 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/S | 0.4883 | ambiguous | 0.5578 | ambiguous | -1.05 | Destabilizing | 0.895 | D | 0.657 | neutral | None | None | None | None | N |
D/T | 0.7264 | likely_pathogenic | 0.785 | pathogenic | -0.778 | Destabilizing | 0.983 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/V | 0.9069 | likely_pathogenic | 0.9379 | pathogenic | -0.072 | Destabilizing | 0.978 | D | 0.673 | neutral | N | 0.518163586 | None | None | N |
D/W | 0.9956 | likely_pathogenic | 0.9975 | pathogenic | -0.383 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
D/Y | 0.8758 | likely_pathogenic | 0.9294 | pathogenic | -0.288 | Destabilizing | 0.999 | D | 0.649 | neutral | D | 0.540168635 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.