Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31537 | 94834;94835;94836 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
N2AB | 29896 | 89911;89912;89913 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
N2A | 28969 | 87130;87131;87132 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
N2B | 22472 | 67639;67640;67641 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
Novex-1 | 22597 | 68014;68015;68016 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
Novex-2 | 22664 | 68215;68216;68217 | chr2:178546819;178546818;178546817 | chr2:179411546;179411545;179411544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.999 | N | 0.708 | 0.314 | 0.256283259241 | gnomAD-4.0.0 | 6.85101E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00709E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5075 | ambiguous | 0.4896 | ambiguous | -0.027 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | I |
K/C | 0.8067 | likely_pathogenic | 0.8063 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/D | 0.8218 | likely_pathogenic | 0.8293 | pathogenic | 0.038 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/E | 0.4132 | ambiguous | 0.411 | ambiguous | 0.047 | Stabilizing | 0.996 | D | 0.569 | neutral | N | 0.481152565 | None | None | I |
K/F | 0.9303 | likely_pathogenic | 0.9308 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
K/G | 0.6909 | likely_pathogenic | 0.7068 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | I |
K/H | 0.469 | ambiguous | 0.473 | ambiguous | -0.528 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
K/I | 0.6412 | likely_pathogenic | 0.6168 | pathogenic | 0.452 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
K/L | 0.5801 | likely_pathogenic | 0.5698 | pathogenic | 0.452 | Stabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | I |
K/M | 0.469 | ambiguous | 0.4521 | ambiguous | 0.275 | Stabilizing | 1.0 | D | 0.667 | neutral | D | 0.524215482 | None | None | I |
K/N | 0.7288 | likely_pathogenic | 0.7418 | pathogenic | 0.2 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | N | 0.4725341 | None | None | I |
K/P | 0.5507 | ambiguous | 0.5049 | ambiguous | 0.321 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/Q | 0.2211 | likely_benign | 0.2187 | benign | 0.02 | Stabilizing | 0.999 | D | 0.71 | prob.delet. | N | 0.468900023 | None | None | I |
K/R | 0.0781 | likely_benign | 0.0787 | benign | -0.06 | Destabilizing | 0.64 | D | 0.291 | neutral | N | 0.461473513 | None | None | I |
K/S | 0.6639 | likely_pathogenic | 0.67 | pathogenic | -0.295 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | I |
K/T | 0.3896 | ambiguous | 0.3865 | ambiguous | -0.133 | Destabilizing | 0.999 | D | 0.639 | neutral | N | 0.501818625 | None | None | I |
K/V | 0.5102 | ambiguous | 0.4777 | ambiguous | 0.321 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
K/W | 0.901 | likely_pathogenic | 0.9007 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/Y | 0.8516 | likely_pathogenic | 0.8573 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.